Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  304 bits (779), Expect = 2e-87
 Identities = 156/325 (48%), Positives = 221/325 (68%), Gaps = 10/325 (3%)

Query: 13  LLLDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFARA 72
           ++L  +DL  H+ +   S   +    T++A++GV+  L  G+TL VVGESGCGKST ARA
Sbjct: 3   VVLTARDLTRHYEV---SRGLFKGHATVRALNGVSFELEAGKTLAVVGESGCGKSTLARA 59

Query: 73  IIGLVQATHGEVVWLGQDLTRMQEVKRRATRKQIQMIFQDPLASLNPRMTVGDIIAEPLQ 132
           +  + + + G +   GQ++    + +R+  RK +QM+FQ P ASLNPR  VGD +AEPL 
Sbjct: 60  LTLIEEPSSGSLKIAGQEVAGADKAQRKQLRKDVQMVFQSPYASLNPRQKVGDQLAEPL- 118

Query: 133 TFYPELSKQEVKDRVKEMMAKVGLLPNVINRYPHEFSGGQCQRIGIARALILKPKMIICD 192
                LS  E +++V+ MM +VGL P    RYPH FSGGQ QRI +ARA++L+PK+++ D
Sbjct: 119 LINTNLSAAERREKVQAMMKQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVAD 178

Query: 193 EPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGNAVELGVS 252
           EP SALDVSIQAQV+NL  +LQ+E   + VFI+H+L+VV+H++D V+VMYLG  VE+G  
Sbjct: 179 EPTSALDVSIQAQVLNLFMDLQQEFNTAYVFISHNLAVVQHVADDVMVMYLGRPVEVGPK 238

Query: 253 KELFANPKHPYTKALMSAVPI--PDPNIERNKTIQMLEGDLPSPMNPPSGCVFRTRCPQA 310
           ++++A P HPYT+AL+SA P   PDPN  + K +    G+LP+P+NPP GC F  RCP A
Sbjct: 239 EDIYARPLHPYTQALLSATPTIHPDPNKPKIKIV----GELPNPLNPPPGCAFHKRCPYA 294

Query: 311 TAECAKTKPVIKGSDIHSVSCLYAE 335
           TA C+  +P ++  D   V+C YAE
Sbjct: 295 TARCSTEEPQLRPLDNRQVACHYAE 319