Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., Oligopeptide ABC transporter, ATP-binding protein OppF (TC 3.A.1.5.1) from Variovorax sp. SCN45

 Score =  315 bits (807), Expect = 1e-90
 Identities = 159/308 (51%), Positives = 216/308 (70%), Gaps = 6/308 (1%)

Query: 14  LLDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFARAI 73
           LL V++L+ H+  T    W   +   ++AVDGV+  +  GETL +VGESGCGK+T A+++
Sbjct: 9   LLRVRELRKHY--TAPKRWLSPRKPPIQAVDGVSFSVARGETLSLVGESGCGKTTTAKSV 66

Query: 74  IGLVQATHGEVVWLGQDLTRMQEVKRRATRKQIQMIFQDPLASLNPRMTVGDIIAEPLQT 133
           + LV+ + G V   G++L  +   + R  R+ +Q+IFQDP ASLNPR+T GDI+AEP++ 
Sbjct: 67  LRLVEPSAGSVQLEGEELLTLSPEEMRMRRRDLQIIFQDPYASLNPRLTAGDIVAEPMRN 126

Query: 134 FYP--ELSKQEVKDRVKEMMAKVGLLPNVINRYPHEFSGGQCQRIGIARALILKPKMIIC 191
           F         E ++RV+ + ++VGL P    +YPHEFSGGQ QR+GIARAL L PK+I+C
Sbjct: 127 FSSLGTGGAAERRERVQWLFSRVGLRPEAAKKYPHEFSGGQRQRLGIARALALNPKLIVC 186

Query: 192 DEPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGNAVELGV 251
           DEPVSALDVS+QAQVVNLL +LQ E G++ +F+AHDL+VV+HIS RV VMYLG+ VE+  
Sbjct: 187 DEPVSALDVSVQAQVVNLLMDLQAEFGIAYLFVAHDLAVVRHISHRVAVMYLGHIVEIAD 246

Query: 252 SKELFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPMNPPSGCVFRTRCPQAT 311
              LF+ P HPYT+ L+SAVP+P+P     +   +L+GD PSP NPPSGC F TRCP A 
Sbjct: 247 RDTLFSAPLHPYTEILLSAVPVPNPRTPARR--MLLQGDPPSPANPPSGCRFHTRCPMAQ 304

Query: 312 AECAKTKP 319
           A C +  P
Sbjct: 305 AVCKEKVP 312