Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  290 bits (742), Expect = 4e-83
 Identities = 155/326 (47%), Positives = 221/326 (67%), Gaps = 15/326 (4%)

Query: 14  LLDVKDLKVHFNITPKSAWPWT------KP-VTLKAVDGVNVRLYEGETLGVVGESGCGK 66
           L+   DL   F+++P    PW       KP V L AVDGV+  +  G+TL +VGESGCGK
Sbjct: 19  LVVAHDLARTFDVSP----PWLNRVLERKPRVLLHAVDGVSFSIERGKTLALVGESGCGK 74

Query: 67  STFARAIIGLVQATHGEVVWLGQDL-TRMQEVKRRATRKQIQMIFQDPLASLNPRMTVGD 125
           ST AR ++GL   T G + + GQD     +  + R  R++IQMIFQDP ASLNPR  V D
Sbjct: 75  STVARLLVGLYAPTRGGLQFDGQDAHAAFKTSEGRKLRRRIQMIFQDPYASLNPRWIVED 134

Query: 126 IIAEPLQTFYPELSKQEVKDRVKEMMAKVGLLPNVINRYPHEFSGGQCQRIGIARALILK 185
           II EPL+       K  +++RV E++  VGL P  +++YPH+FSGGQ QRI IARAL  +
Sbjct: 135 IIGEPLREHGIISDKAALRERVGELLKSVGLSPLDMSKYPHQFSGGQRQRISIARALATQ 194

Query: 186 PKMIICDEPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGN 245
           P+ ++CDEP SALDVS+QAQV+N++K+LQ+E GL+ +FI+H+L+VV+H++D+V VMYLG 
Sbjct: 195 PEFLVCDEPTSALDVSVQAQVLNIMKDLQREQGLTYLFISHNLAVVRHVADQVGVMYLGR 254

Query: 246 AVELGVSKELFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPMNPPSGCVFRT 305
            VE+   ++LFA P+HPYT+ L+ A+P    +  R++T   ++G++P+P+NPP+GC F  
Sbjct: 255 LVEVADKQKLFAAPQHPYTRMLLDAIP-QMKHTGRSRT--PVQGEVPNPLNPPTGCAFHP 311

Query: 306 RCPQATAECAKTKPVIKGSDIHSVSC 331
           RCP A A C+  +P + G     V+C
Sbjct: 312 RCPHANARCSAERPKLLGIAGVQVAC 337