Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  273 bits (697), Expect = 1e-77
 Identities = 142/297 (47%), Positives = 196/297 (65%), Gaps = 7/297 (2%)

Query: 37  PVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFARAIIGLVQATHGEVVWLGQDLTRMQE 96
           PV   AVD V++ +  GE +G+VGESGCGKST  R   GL+  T GEV+  G+ +  +  
Sbjct: 391 PVVTHAVDVVDLSVRPGEVVGLVGESGCGKSTLGRIAAGLLTPTEGEVIVGGKPVASLSA 450

Query: 97  VKRRATRKQIQMIFQDPLASLNPRMTVGDIIAEPLQTF-YPELSKQEVKDRVKEMMAKVG 155
            ++ A R +IQM+FQDP ASLNPR+ V  I+ E        + + Q+  D V   + + G
Sbjct: 451 QEQLAARLRIQMVFQDPYASLNPRLRVSRIVGEAAMLHGLTDAAGQD--DYVCAQLERAG 508

Query: 156 LLPNVINRYPHEFSGGQCQRIGIARALILKPKMIICDEPVSALDVSIQAQVVNLLKELQK 215
           L P + +RYPH+FSGGQ QRIGIARAL ++P M++CDE V+ALDVSIQAQ++NL  +L+ 
Sbjct: 509 LDPALRHRYPHQFSGGQRQRIGIARALAVQPSMLVCDEAVAALDVSIQAQILNLFMDLRD 568

Query: 216 ELGLSLVFIAHDLSVVKHISDRVLVMYLGNAVELGVSKELFANPKHPYTKALMSAVPIPD 275
           +LGL+ +FI+HDL V++H+ DRV+VMYLG  VE     +LFA P HPYT+AL++ +P  D
Sbjct: 569 QLGLAYLFISHDLGVIEHLCDRVVVMYLGRVVESAPVADLFARPAHPYTQALLAEIPSID 628

Query: 276 PNIERNKTIQMLEGDLPSPMNPPSGCVFRTRCPQATAECAKTKPVIKGSDI-HSVSC 331
               R  T   + G++PSP+ PPSGC F  RCPQA   C    P ++G  I H+ +C
Sbjct: 629 ---ARGTTFSAIRGEIPSPIAPPSGCHFHPRCPQAMPRCRTEVPRLRGIAIRHATAC 682



 Score =  216 bits (551), Expect = 1e-60
 Identities = 123/333 (36%), Positives = 202/333 (60%), Gaps = 26/333 (7%)

Query: 15  LDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFARAII 74
           L+V++L+  F+         T+   L  VDGV+  L  G+ LG+VGESG GKS    +I+
Sbjct: 14  LEVRNLQTRFH---------TRAGVLPVVDGVSFTLGRGKVLGLVGESGSGKSVTGFSIM 64

Query: 75  GLV----QATHGEVVWLGQDLTRMQEVKRRATR-KQIQMIFQDPLASLNPRMTVGDIIAE 129
           GLV    +   G+V++ G++LT++  ++RR  R  +I MIFQDP+A+LNP + V   + E
Sbjct: 65  GLVDPPGKVEGGQVLFQGRELTQLPAIERRELRGNRIAMIFQDPMATLNPVLRVDTQMIE 124

Query: 130 PLQTFYPELSKQEVKDRVKEMMAKVGLLPNVINR---YPHEFSGGQCQRIGIARALILKP 186
            ++  +  +S +E +   ++ +  +G+ P+   R   YPH+ SGG  QR+ IA A++  P
Sbjct: 125 AVKA-HKRVSTEEARRHARDTLGLMGI-PSPEERLRAYPHQLSGGMRQRVAIAIAMLHGP 182

Query: 187 KMIICDEPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGNA 246
            +II DEP +ALDV+IQAQ+++ +++L +E G SL++I+HDLSVV  ++D + VMY G  
Sbjct: 183 DLIIADEPTTALDVTIQAQILSEVQKLVRETGTSLIWISHDLSVVASLADEIAVMYAGRI 242

Query: 247 VELGVSKELFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPMNPPSGCVFRTR 306
           VE G   ++  +P+HPYT+ L+ ++P  +   ER   ++ ++G  PS +  P+GC F  R
Sbjct: 243 VEHGTVADVLDHPQHPYTRGLIDSLPSAN---ERGARLRQIQGMTPSLLKMPAGCAFAPR 299

Query: 307 CPQATAECAKTKPVIK----GSDIHSVSCLYAE 335
           CP A A C + +P +      +  H V C + +
Sbjct: 300 CPHADAACEQQRPEVSRPRHDAPWHEVRCFHPQ 332