Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  256 bits (654), Expect = 9e-73
 Identities = 136/269 (50%), Positives = 184/269 (68%), Gaps = 3/269 (1%)

Query: 2   GGLDKMSVEKKLLLDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGE 61
           G  D ++V+   LL  +D++V F + P   +   +    +AV G+++ L +GETLG+VGE
Sbjct: 264 GSKDPVAVDAAPLLKAEDIRVKFLVKPY--FISRRNQYFEAVKGISLELKQGETLGIVGE 321

Query: 62  SGCGKSTFARAIIGLVQATHGEVVWLGQDLTRMQEVKRRATRKQIQMIFQDPLASLNPRM 121
           SG GKST  RA+IGL+ +T G++ + GQD   + E +R A +K IQM+FQDP  SL+PRM
Sbjct: 322 SGSGKSTLGRALIGLLPST-GQIAFKGQDFRALSEKQRLALKKDIQMVFQDPYGSLSPRM 380

Query: 122 TVGDIIAEPLQTFYPELSKQEVKDRVKEMMAKVGLLPNVINRYPHEFSGGQCQRIGIARA 181
           TVG+II E L    P +SK E   R +  + +V L PN INRYPHEFSGGQ QRI IARA
Sbjct: 381 TVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDPNSINRYPHEFSGGQRQRIAIARA 440

Query: 182 LILKPKMIICDEPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVM 241
           LIL+P  I+ DEP SALD S+Q  V+ LLKE+QK   +  +FI+HDL+VVK +SDRVLVM
Sbjct: 441 LILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYLFISHDLAVVKALSDRVLVM 500

Query: 242 YLGNAVELGVSKELFANPKHPYTKALMSA 270
             G  +E G ++ +F NP+H YTK L++A
Sbjct: 501 QKGQVMEQGSAESIFHNPQHEYTKKLIAA 529



 Score =  190 bits (482), Expect = 8e-53
 Identities = 109/267 (40%), Positives = 165/267 (61%), Gaps = 18/267 (6%)

Query: 14  LLDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFARAI 73
           LL V++L V F          T    + AV  V+  +  GETL +VGESG GKS    A+
Sbjct: 6   LLQVRNLSVSFT---------TNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNAL 56

Query: 74  IGLVQAT-----HGEVVWLGQDLTRMQEVKRRATR-KQIQMIFQDPLASLNPRMTVGDII 127
           + L+           +++ G++L    + + R  R  +I MIFQ+P+ SLNP M VG  +
Sbjct: 57  MQLLPKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQV 116

Query: 128 AEPLQTFYPELSKQEVKDRVKEMMAKVGLLP--NVINRYPHEFSGGQCQRIGIARALILK 185
           AE ++  +  +S+ + K RV E+   V L        ++PHEFSGGQ QRI IA ALI +
Sbjct: 117 AEAIRC-HRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINE 175

Query: 186 PKMIICDEPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGN 245
           P ++I DEP +ALDV++QA+V+ L+KE+Q  +G++++FI HDL VVK ++DRVLVM  G+
Sbjct: 176 PDILIADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGD 235

Query: 246 AVELGVSKELFANPKHPYTKALMSAVP 272
            VE G +++LF  P+H YT+ L++++P
Sbjct: 236 VVEQGSTEQLFLQPEHDYTRMLINSIP 262