Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., dipeptide ABC transporter, binding subunit from Pseudomonas putida KT2440

 Score =  299 bits (766), Expect = 6e-86
 Identities = 151/323 (46%), Positives = 217/323 (67%), Gaps = 6/323 (1%)

Query: 13  LLLDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFARA 72
           ++L  ++L  H+ +   S   +     ++A++GV+  L  G+TL VVGESGCGKST ARA
Sbjct: 3   VVLSARELTRHYEV---SRGLFKGHALVRALNGVSFELEAGKTLAVVGESGCGKSTLARA 59

Query: 73  IIGLVQATHGEVVWLGQDLTRMQEVKRRATRKQIQMIFQDPLASLNPRMTVGDIIAEPLQ 132
           +  + + + G +   G ++    + +R+  R+ +QM+FQ P ASLNPR  +GD +AEPL 
Sbjct: 60  LTLIEEPSSGSLQIAGTEVKGASKAERKQLRRDVQMVFQSPYASLNPRQKIGDQLAEPL- 118

Query: 133 TFYPELSKQEVKDRVKEMMAKVGLLPNVINRYPHEFSGGQCQRIGIARALILKPKMIICD 192
                LSK E +D+V++MM +VGL P    RYPH FSGGQ QRI +ARA++L+PK+++ D
Sbjct: 119 LINTSLSKAERRDKVQKMMEQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVAD 178

Query: 193 EPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGNAVELGVS 252
           EP SALDVSIQAQV+NL  +LQKE   + VFI+H+L+VV+H++D+VLVMYLG   E+G  
Sbjct: 179 EPTSALDVSIQAQVLNLFMDLQKEFNTAYVFISHNLAVVRHVADQVLVMYLGRPAEMGPK 238

Query: 253 KELFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPMNPPSGCVFRTRCPQATA 312
           ++++A P HPYT+AL+SA P   P+  + K    + G+LP+P+NPP GC F  RCP AT 
Sbjct: 239 EDIYAKPLHPYTQALLSATPAIHPDPLKPKI--RIVGELPNPLNPPDGCAFHKRCPYATE 296

Query: 313 ECAKTKPVIKGSDIHSVSCLYAE 335
            CAK  P ++      V+C YAE
Sbjct: 297 RCAKEVPALRQVSTRQVACHYAE 319