Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

 Score =  275 bits (704), Expect = 9e-79
 Identities = 144/282 (51%), Positives = 196/282 (69%), Gaps = 6/282 (2%)

Query: 42  AVDGVNVRLYEGETLGVVGESGCGKSTFARAIIGLVQATHGEVVWLGQDLTRMQEVKRRA 101
           A+D V++ + E E +G+VGESGCGKST  R + GL+QA+ G V++ G+ L  M       
Sbjct: 39  ALDDVSLTVSEREVVGIVGESGCGKSTLGRVVAGLLQASEGSVLFRGKQLAEMDGKAAED 98

Query: 102 TRKQIQMIFQDPLASLNPRMTVGDII-AEPLQTFYPELSKQEVKDRVKEMMAKVGLLPNV 160
            R ++QMIFQDP +SLNPR  V +II A PL   +   S +E+ D V + M + GL P++
Sbjct: 99  ARLKVQMIFQDPSSSLNPRQRVREIIGAAPLH--HKMTSARELDDYVSQQMERSGLDPSM 156

Query: 161 INRYPHEFSGGQCQRIGIARALILKPKMIICDEPVSALDVSIQAQVVNLLKELQKELGLS 220
            + +PH+FSGGQ QRIGIARAL ++P M+ICDE V+ALDVSIQAQ++NL  +L+++L L+
Sbjct: 157 ASWFPHQFSGGQRQRIGIARALAVQPDMLICDESVAALDVSIQAQILNLFLDLREQLDLT 216

Query: 221 LVFIAHDLSVVKHISDRVLVMYLGNAVELGVSKELFANPKHPYTKALMSAVPIPDPNIER 280
            +FI+HDLSVV+HISDRV+VMYLG  VE     ELFA+P HPYT+AL+   P  DP   R
Sbjct: 217 YLFISHDLSVVEHISDRVVVMYLGRVVEEAPVAELFAHPNHPYTRALLQERPSLDPVQRR 276

Query: 281 NKTIQMLEGDLPSPMNPPSGCVFRTRCPQATAECAKTKPVIK 322
             +I   EG++PSP++PPSGC F  RCP A   C   +P ++
Sbjct: 277 FSSI---EGEIPSPLSPPSGCHFHPRCPFAMERCRVERPELR 315