Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  303 bits (776), Expect = 4e-87
 Identities = 154/299 (51%), Positives = 219/299 (73%), Gaps = 8/299 (2%)

Query: 39  TLKAVDGVNVRLYEGETLGVVGESGCGKSTFARAIIGLVQATHGEVVWLGQDLTRMQEVK 98
           T++AVD V++ +  GET+ +VGESGCGKS+  ++++ LV+ + G + + G D+T M   +
Sbjct: 19  TVRAVDDVSLDIEAGETVALVGESGCGKSSLGKSLMRLVEPSSGRITFKGADVTAMTSSQ 78

Query: 99  RRATRKQIQMIFQDPLASLNPRMTVGDIIAEPLQTFYPELSKQEVKDRVKEMMAKVGLLP 158
            R  R++IQMIFQDP ASLNPR TV  I+  PL+  +    +   ++ V+ ++A+VGL P
Sbjct: 79  LRGIRRRIQMIFQDPFASLNPRQTVRTILTAPLKV-HGIGDRARQREIVEAIVAQVGLPP 137

Query: 159 NVINRYPHEFSGGQCQRIGIARALILKPKMIICDEPVSALDVSIQAQVVNLLKELQKELG 218
           + ++RYPHEFSGGQ QRIGIARAL+L+P++++CDEPVSALD+SIQAQ++NLL E++K L 
Sbjct: 138 DALDRYPHEFSGGQRQRIGIARALVLEPELVVCDEPVSALDLSIQAQILNLLVEMKKRLS 197

Query: 219 LSLVFIAHDLSVVKHISDRVLVMYLGNAVELGVSKELFANPKHPYTKALMSAVPIPDPNI 278
           LS +F++HDLSVV++ SDRVLVMYLG  VE   + EL+A+PKHPYT+AL++AVP P    
Sbjct: 198 LSYLFVSHDLSVVRYFSDRVLVMYLGKIVESAPTAELWASPKHPYTRALLAAVPDP---- 253

Query: 279 ERNKTIQMLEGDLPSPMNPPSGCVFRTRCPQATAECAKTKP--VIKGSDIHSVSCLYAE 335
            R K    + GDLPSP +PP+GC F TRCP AT  C +  P   + G + H+V+C +A+
Sbjct: 254 ARRKQAAPISGDLPSPHDPPAGCRFHTRCPLATDLCREKAPDYALFGKN-HAVACHHAQ 311