Pairwise Alignments

Query, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 611 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  258 bits (659), Expect = 3e-73
 Identities = 138/256 (53%), Positives = 182/256 (71%), Gaps = 2/256 (0%)

Query: 42  AVDGVNVRLYEGETLGVVGESGCGKSTFARAIIGLVQATHGEVVWLGQDLTRMQEVKRRA 101
           AV+ V+  L  GETL +VGESGCGKST  RAI+ L++   G VV  G+++  + +   R 
Sbjct: 337 AVENVSFDLRAGETLSLVGESGCGKSTTGRAIMRLIEPDAGSVVVNGENILTLDKSGMRE 396

Query: 102 TRKQIQMIFQDPLASLNPRMTVGDIIAEPLQTFYPELSKQEVKDRVKEMMAKVGLLPNVI 161
            RK +QMIFQDP ASLNPRMTVG  IAEP    +   S +E K+ V +M+ KVGL P++ 
Sbjct: 397 MRKTVQMIFQDPFASLNPRMTVGAAIAEPFLE-HRMGSAREAKEVVADMLNKVGLSPDMA 455

Query: 162 NRYPHEFSGGQCQRIGIARALILKPKMIICDEPVSALDVSIQAQVVNLLKELQKELGLSL 221
            RYPHEFSGGQ QRI IARAL L+PK+I+ DE VSALDVSI+AQV+NL+ +LQ+ L L+ 
Sbjct: 456 ARYPHEFSGGQRQRICIARALALQPKVIVADESVSALDVSIKAQVINLMLDLQQSLDLAF 515

Query: 222 VFIAHDLSVVKHISDRVLVMYLGNAVELGVSKELFANPKHPYTKALMSAVPIPDPNIERN 281
           +FI+HD++VV+ +S RV VMYLG  VE+G   ++F NP+H YT+ LM+AVP+PDP+  RN
Sbjct: 516 LFISHDMAVVERVSHRVAVMYLGEIVEIGPRADVFDNPQHDYTRKLMAAVPVPDPD-RRN 574

Query: 282 KTIQMLEGDLPSPMNP 297
                   +L SP+ P
Sbjct: 575 TRRGAANDELKSPIRP 590



 Score =  196 bits (497), Expect = 2e-54
 Identities = 114/268 (42%), Positives = 168/268 (62%), Gaps = 19/268 (7%)

Query: 14  LLDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFARAI 73
           +L V++L   F++     W   KPV    V  ++  +  GET+ +VGESG GKS  + +I
Sbjct: 15  VLSVRNLTTSFHVD--GGW---KPV----VRDISFDVGPGETVAIVGESGSGKSVTSLSI 65

Query: 74  IGLVQA----THGEVVWLGQDLTRMQE-VKRRATRKQIQMIFQDPLASLNPRMTVGDIIA 128
           + L+        GE++  G++L  + E   RR    ++ MIFQ+P+ SLNP  T+GD I+
Sbjct: 66  MRLLDRESSRVQGEILLGGRNLLSLSEDAMRRVRGNEVAMIFQEPMTSLNPLFTIGDQIS 125

Query: 129 EPLQTFYPELSKQEVKDRVKEMMAKVGLLPNVINR---YPHEFSGGQCQRIGIARALILK 185
           E L    P +SK E +     ++ KV + P+  +R   YPH FSGG  QR+ IA AL  K
Sbjct: 126 EALLCHQP-MSKAEARAETVRLLEKVRI-PSAASRFDEYPHRFSGGMRQRVMIAMALASK 183

Query: 186 PKMIICDEPVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGN 245
           PK++I DEP +ALDV+IQ Q+++L+K LQ+E G S++FI HD+ VV  I+DR +VMY G 
Sbjct: 184 PKLLIADEPTTALDVTIQGQILDLIKTLQEEEGTSVLFITHDMGVVAEIADRTVVMYRGE 243

Query: 246 AVELGVSKELFANPKHPYTKALMSAVPI 273
            VE+G + ++F   KHPYT+AL+SAVP+
Sbjct: 244 QVEVGATADIFHRGKHPYTRALLSAVPV 271