Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  282 bits (721), Expect = 9e-81
 Identities = 155/316 (49%), Positives = 204/316 (64%), Gaps = 3/316 (0%)

Query: 2   MSLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKN 61
           MSLL++K+L V F  +   V  V+ L+ S+ +GE L IVGESGSGKS T+ A+MGL+   
Sbjct: 1   MSLLEIKNLNVRFGDKTA-VPVVDGLDISVDKGEVLAIVGESGSGKSVTMMALMGLIEHP 59

Query: 62  GKITGSA-KFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHK 120
           G +T  A  F+GK++L L  R+  ++  + +AM+FQDPMT+LNP   V  Q+ EVL LH 
Sbjct: 60  GIVTADALNFDGKDMLKLSNRQRRQIVGKDLAMVFQDPMTALNPSYTVGFQIEEVLRLHL 119

Query: 121 GMGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEP 180
            M   +A + ++ +LE V+IP A  R+  YPH+ SGGM QRV IAMA+   PKLLIADEP
Sbjct: 120 KMSGKQARKRAIELLEKVEIPGAASRMDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEP 179

Query: 181 TTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVND 240
           TTALDVT+QAQIMELL  L++E N  +++ITHDL VVA +  +V VMYAG+ +E G V  
Sbjct: 180 TTALDVTIQAQIMELLLALQKEQNMGLVLITHDLAVVAETAQRVCVMYAGQAVEVGQVPQ 239

Query: 241 IFYNPSHPYAEGLLSAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKRE 300
           +F  P+HPY+E LL AIP        L T+PG  P     P GC    RC  V + C+ +
Sbjct: 240 LFDIPAHPYSEALLKAIPEHSLGATRLATLPGIVPGRYDRPQGCLLSPRCPYVQENCRTQ 299

Query: 301 APILLPFGNSRQRACF 316
            P L P  NS  R CF
Sbjct: 300 RPDLDPKTNSLAR-CF 314