Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 346 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  282 bits (721), Expect = 1e-80
 Identities = 152/323 (47%), Positives = 210/323 (65%), Gaps = 12/323 (3%)

Query: 5   LDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAK--NG 62
           L V +L   F T+DG+V +V D++FS++ G+T  +VGESGSGKS T   +M LL K  N 
Sbjct: 11  LAVSNLSTSFPTEDGLVRSVADVSFSIQPGKTTALVGESGSGKSVTSLTLMRLLPKTANA 70

Query: 63  KITGSAKF---EGK--EILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLM 117
           +++GSA F   EGK  ++L + ERE+  +R  Q++MIFQ+PMTSLNP   + +Q+ E + 
Sbjct: 71  QVSGSASFVTREGKTLDLLRIGEREMRSLRGNQLSMIFQEPMTSLNPVFTIGEQIAESVR 130

Query: 118 LHKGMGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIA 177
           LHKG+ +  A   + RMLE V+IP A +RI  YPH+ SGGMRQRVMIA+A+ C P LLIA
Sbjct: 131 LHKGLDRKAAMAHARRMLELVEIPAAAQRIDEYPHQLSGGMRQRVMIALAMACDPTLLIA 190

Query: 178 DEPTTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGS 237
           DEPTTALDVT+QAQI+EL+  L+ E   +I+ ITH+LGVVA   D V+V+YAGR +E   
Sbjct: 191 DEPTTALDVTIQAQILELMRRLQAETGMSILFITHNLGVVAHHADDVVVLYAGRVVESAP 250

Query: 238 VNDIFYNPSHPYAEGLLSAIP---RLDTEGEV--LPTIPGNPPNLLRLPVGCPYQERCHR 292
           V  +F  P HPY +GLL+ +P   RL ++ +   L  I G   + L  P GC ++ RC +
Sbjct: 251 VRPLFVQPEHPYTQGLLACLPGKARLPSQPKPKRLFAIRGQVSSPLAPPPGCAFEPRCDQ 310

Query: 293 VTDRCKREAPILLPFGNSRQRAC 315
               C    P L+   + R+  C
Sbjct: 311 ALAECSAAMPPLIETQHGREARC 333