Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  298 bits (762), Expect = 2e-85
 Identities = 149/308 (48%), Positives = 212/308 (68%), Gaps = 3/308 (0%)

Query: 2   MSLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKN 61
           M LL+V +L++   TQ G   AV  ++FSL++GETLGIVGESG GKS TV ++MGLL  +
Sbjct: 1   MPLLEVNNLQIGLQTQRGPAQAVRGISFSLERGETLGIVGESGCGKSITVMSLMGLLPSS 60

Query: 62  GKITGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKG 121
            ++TGS K +G+E++ LPE+++ ++R  +I MIFQ+PMT+LNP   ++ Q+ E L LH+G
Sbjct: 61  AQVTGSIKLDGQELVGLPEKQMCQIRGNRIGMIFQEPMTALNPVHTIARQVGEPLQLHRG 120

Query: 122 MGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPT 181
           + KA+A +E++ +L+ V IP+A  R+  YPH+FSGG RQR+ IAMAL C P LLIADEPT
Sbjct: 121 LTKAQARKEALSLLDRVGIPDAASRLDAYPHQFSGGQRQRIGIAMALACGPDLLIADEPT 180

Query: 182 TALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDI 241
           TALDVT+Q Q+++L+  L +E   A+I+I+HDLGV+A S  ++LVMY G  +E G  + +
Sbjct: 181 TALDVTIQKQVLDLIQSLVKEMGMAMILISHDLGVIANSVKRMLVMYGGSAVESGPTDTV 240

Query: 242 FYNPSHPYAEGLLSAIPRLD-TEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKRE 300
           F   +HPY  GL +A P +       LPTI G+ P L+ +P GC +  RC    D C+  
Sbjct: 241 FAGRAHPYTRGLFAARPAIGAVRAGRLPTIRGSVPELVDMPRGCAFAGRCAHTIDLCQST 300

Query: 301 AP--ILLP 306
            P   LLP
Sbjct: 301 RPQATLLP 308