Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  300 bits (769), Expect = 2e-86
 Identities = 152/302 (50%), Positives = 204/302 (67%), Gaps = 1/302 (0%)

Query: 2   MSLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKN 61
           M LL VKDL +E  TQ G   AV  ++F+L++GETLGIVGESG GKS TV ++MGLL   
Sbjct: 1   MPLLQVKDLHIELQTQRGPAEAVRGIDFTLERGETLGIVGESGCGKSITVMSLMGLLPST 60

Query: 62  GKITGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKG 121
            K+TGS +F+G E++   E+++ ++R  +I MIFQ+PMT+LNP   ++ Q+ E L LH+G
Sbjct: 61  AKVTGSIRFDGTELVGRDEKDMCQIRGNRIGMIFQEPMTALNPVHTIARQVGEPLRLHRG 120

Query: 122 MGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPT 181
           + KA+A +E + +LE V IP+A  R+  YPH+FSGG RQR+ IAMAL C P LLIADEPT
Sbjct: 121 LSKADARKEVLALLERVGIPDAASRLDAYPHQFSGGQRQRIGIAMALACGPDLLIADEPT 180

Query: 182 TALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDI 241
           TALDVT+Q QI+EL+  L  E   A+I+I+HDLGV+A +  K+LVMY G  +E G    +
Sbjct: 181 TALDVTIQKQILELIQSLVAERGMALILISHDLGVIAQTVSKMLVMYGGSVVESGPTEAV 240

Query: 242 FYNPSHPYAEGLLSAIPRLDT-EGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKRE 300
           F   +HPY +GL +A P +    G  L TI G+ P L+ LP GCP+  RC    D C   
Sbjct: 241 FARRAHPYTQGLFAARPAIGAPRGLRLATIKGSVPELVDLPKGCPFAGRCSYTVDACHTT 300

Query: 301 AP 302
            P
Sbjct: 301 RP 302