Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., Oligopeptide transport ATP-binding protein @ Glutathione ABC transporter, ATP-binding protein GsiA from Variovorax sp. SCN45

 Score =  259 bits (662), Expect = 1e-73
 Identities = 140/273 (51%), Positives = 184/273 (67%), Gaps = 8/273 (2%)

Query: 4   LLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNGK 63
           +L V DL V FST +  V AV  L+F +  GETL +VGESGSGKS T  A+M L+   G 
Sbjct: 13  VLAVDDLTVRFSTSERTVDAVKKLSFHVDHGETLAVVGESGSGKSVTSLALMRLVEHGGG 72

Query: 64  --ITGSAKFEGK--EILNLPERE---LNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVL 116
             + GS  F  +  E+L+L +     +  +R   IAMIFQ+PMTSLNP     DQ+ E +
Sbjct: 73  RILGGSMAFRRRNGEVLDLAQARDSTMRGIRGADIAMIFQEPMTSLNPVFTAGDQIAEAI 132

Query: 117 MLHKGMGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLI 176
            +H+G   + A  E++RMLE V+IPEAR  +  +PH+ SGGMRQRVMIAMAL C+P+LLI
Sbjct: 133 RIHQGKSDSAARAEALRMLELVRIPEARNVLDRFPHQLSGGMRQRVMIAMALSCKPQLLI 192

Query: 177 ADEPTTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYG 236
           ADEPTTALDVT+QAQI++L+ EL++E    ++ ITHD+GVVA   D+VLVMY G  +E G
Sbjct: 193 ADEPTTALDVTIQAQILQLIRELQKEMRMGVLFITHDMGVVAEIADRVLVMYRGDKVEAG 252

Query: 237 SVNDIFYNPSHPYAEGLLSAIPRLDT-EGEVLP 268
           S + +F  P HPY   LLSA+P+L   +G  LP
Sbjct: 253 SSDTVFAAPQHPYTRALLSAVPKLGAMQGTDLP 285



 Score =  185 bits (469), Expect = 3e-51
 Identities = 114/286 (39%), Positives = 164/286 (57%), Gaps = 17/286 (5%)

Query: 4   LLDVKDLRVEFSTQDGI-------VTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMG 56
           +L V+DL   F  + G+       V AV  ++F L  GETL +VGESG GKS T  +++ 
Sbjct: 318 ILRVRDLVTRFDVRSGLFGRVKRRVHAVEKISFDLYPGETLALVGESGCGKSTTGRSLLR 377

Query: 57  LLAKNGKITGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVL 116
           L+      +G+ +F G+ I  LP REL  +R   I  IFQDP  SL+P + V   +ME L
Sbjct: 378 LVESQ---SGAIEFGGQNIRELPTRELQALR-RNIQFIFQDPFASLDPRVTVGFSIMEPL 433

Query: 117 MLHKGMGKAEAFEESVRMLEAVKIP-EARKRITMYPHEFSGGMRQRVMIAMALLCRPKLL 175
           ++H     AEA +    +L+ V +P E  +R   YPHEFSGG RQR+ IA AL   PK++
Sbjct: 434 LIHGIAKGAEAQQRVDWLLQKVGLPPEVAQR---YPHEFSGGQRQRIAIARALALNPKVV 490

Query: 176 IADEPTTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEY 235
           +ADE  +ALDV++QAQI+ L+ +L+RE   A + I+HD+ VV     +V VMY G+ +E 
Sbjct: 491 VADESVSALDVSIQAQIVNLMLDLQRELGVAFLFISHDMAVVERISHRVAVMYLGQIVEI 550

Query: 236 GSVNDIFYNPSHPYAEGLLSAIPRLDTEGEVLP--TIPGNPPNLLR 279
           G    +F  P H Y   L++A+P  D      P   + G  P+ +R
Sbjct: 551 GPRRAVFEAPQHAYTRKLMAAVPVADPSRRHKPRALLEGEIPSPIR 596