Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., dipeptide ABC transporter - putative ATP binding subunit from Pseudomonas putida KT2440

 Score =  284 bits (726), Expect = 2e-81
 Identities = 159/316 (50%), Positives = 205/316 (64%), Gaps = 3/316 (0%)

Query: 2   MSLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKN 61
           MSLL + +L V F   +  V  V+ L+  +  GE L IVGESGSGKS T+ A+MGL+   
Sbjct: 1   MSLLQINNLNVRFGDANA-VPVVDGLDLKVDAGEILAIVGESGSGKSVTMMALMGLIDAP 59

Query: 62  GKITG-SAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHK 120
           G+IT  S  F+G ++L L  R+  KV  + IAM+FQDPMT+LNP   V  Q+ EVL  H 
Sbjct: 60  GRITADSLTFDGTDMLKLSGRQRRKVVGKDIAMVFQDPMTALNPSYTVGFQIEEVLRQHL 119

Query: 121 GMGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEP 180
           G+    A + ++ +L+ V+IP A  R+  YPH+ SGGM QRV IAMA+   PKLLIADEP
Sbjct: 120 GLKGKAARQRALELLKKVEIPAAESRLDAYPHQLSGGMSQRVAIAMAIAGEPKLLIADEP 179

Query: 181 TTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVND 240
           TTALDVT+QAQIMELL  L++E N A+I+ITHDL VVA +  +V VMYAG+ +E G V +
Sbjct: 180 TTALDVTIQAQIMELLVNLQKERNMALILITHDLAVVAETARRVCVMYAGQAVEVGQVPE 239

Query: 241 IFYNPSHPYAEGLLSAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKRE 300
           +F  P+HPY+E LL+AIP      E L T+PG  P     PVGC    RC  V D C+R+
Sbjct: 240 LFDVPAHPYSEALLAAIPEHSIGAERLATLPGIVPGRYDRPVGCLLSPRCPYVQDNCRRQ 299

Query: 301 APILLPFGNSRQRACF 316
            P L P  +S  R CF
Sbjct: 300 RPPLDPQAHSLVR-CF 314