Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  259 bits (661), Expect = 8e-74
 Identities = 132/300 (44%), Positives = 186/300 (62%)

Query: 5   LDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNGKI 64
           L+V  L V F  Q   V  V+ ++FS+  G TLG+VGESG GK+ T  A+MGL   NG +
Sbjct: 16  LEVGGLTVAFEKQGRRVEVVSGVSFSIAAGRTLGVVGESGCGKTMTSLAVMGLAPSNGLV 75

Query: 65  TGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKGMGK 124
           +GS +  G+E++   ER     R  + AM+FQ+PM++LNP M +  Q+ EVL+ H+ +G 
Sbjct: 76  SGSIRLAGQEMVGAAERVWADSRGARAAMVFQEPMSALNPVMTIGRQIAEVLVRHRRLGW 135

Query: 125 AEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTAL 184
            EA E++V  L +V IP    R   YPH  SGGMRQR MIA+AL CRP +L+ADEPTTAL
Sbjct: 136 REAHEQAVEALASVGIPSPALRAKDYPHRLSGGMRQRAMIAIALACRPAVLVADEPTTAL 195

Query: 185 DVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDIFYN 244
           DVT+QAQ+++L+ E++     AI  I+H+L V++   D+++VMYAG+ +E    +D+F +
Sbjct: 196 DVTIQAQVLDLMVEMQERLGMAIQFISHNLAVISEIADEIVVMYAGKVVEKAQADDLFTS 255

Query: 245 PSHPYAEGLLSAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKREAPIL 304
           P HPY  GL+  +P        LP IPG  P L     GC +  RC    D C+  +P L
Sbjct: 256 PLHPYTRGLIETLPDPQRRVARLPVIPGAVPKLDVDFRGCRFAGRCRLADDHCRAVSPEL 315