Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  493 bits (1270), Expect = e-144
 Identities = 250/317 (78%), Positives = 272/317 (85%), Gaps = 1/317 (0%)

Query: 4   LLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNGK 63
           LL+V DLRV F+T DG VTAVNDLNF+L+ GETLGIVGESGSGKSQT FA+MGLLA NG+
Sbjct: 17  LLEVNDLRVTFATPDGDVTAVNDLNFTLRAGETLGIVGESGSGKSQTAFALMGLLATNGR 76

Query: 64  ITGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKGMG 123
           I GSA F G+EILNLPERELN +RAEQI+MIFQDPMTSLNPYM+V +QLMEVLMLHKGM 
Sbjct: 77  IGGSATFNGREILNLPERELNTLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMS 136

Query: 124 KAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTA 183
           KAEAFEESVRML+AVK+PEARKR+ MYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTA
Sbjct: 137 KAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTA 196

Query: 184 LDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDIFY 243
           LDVTVQAQIM LLNELKREFNTAIIMITHDLGVVAG CDKVLVMYAGRTMEYG   D+FY
Sbjct: 197 LDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGKARDVFY 256

Query: 244 NPSHPYAEGLLSAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKREAPI 303
            P HPY+ GLL+A+PRLD+EG  + TIPGNPPNLLRLP GCP+Q RC    + C   AP 
Sbjct: 257 QPVHPYSIGLLNAVPRLDSEGAEMLTIPGNPPNLLRLPKGCPFQPRCPHAMEIC-NNAPP 315

Query: 304 LLPFGNSRQRACFSDWE 320
           L  F   R RACF   E
Sbjct: 316 LEAFSPGRLRACFKPVE 332