Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., oligopeptide transporter ATP-binding component (NCBI) from Escherichia coli BW25113

 Score =  494 bits (1273), Expect = e-145
 Identities = 252/318 (79%), Positives = 273/318 (85%), Gaps = 1/318 (0%)

Query: 3   SLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNG 62
           +LL+VKDLRV FST DG VTAVNDLNFSL+ GETLGIVGESGSGKSQT FA+MGLLA NG
Sbjct: 18  ALLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANG 77

Query: 63  KITGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKGM 122
           +I GSA F G+EILNLPE ELNK+RAEQI+MIFQDPMTSLNPYM+V +QLMEVLMLHK M
Sbjct: 78  RIGGSATFNGREILNLPEHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNM 137

Query: 123 GKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTT 182
            KAEAFEESVRML+AVK+PEARKR+ MYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTT
Sbjct: 138 SKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTT 197

Query: 183 ALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDIF 242
           ALDVTVQAQIM LLNELKREFNTAIIMITHDL VVAG CDKVLVMYAGRTMEYG+  D+F
Sbjct: 198 ALDVTVQAQIMTLLNELKREFNTAIIMITHDLVVVAGICDKVLVMYAGRTMEYGNARDVF 257

Query: 243 YNPSHPYAEGLLSAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKREAP 302
           Y P HPY+ GLL+A+PRLD EGE + TIPGNPPNLLRLP GCP+Q RC    + C   AP
Sbjct: 258 YQPVHPYSIGLLNAVPRLDAEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICS-SAP 316

Query: 303 ILLPFGNSRQRACFSDWE 320
            L  F   R RACF   E
Sbjct: 317 PLEEFTPGRLRACFKPVE 334