Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., Dipeptide transport ATP-binding protein DppD from Azospirillum sp. SherDot2

 Score =  290 bits (743), Expect = 3e-83
 Identities = 146/316 (46%), Positives = 203/316 (64%), Gaps = 2/316 (0%)

Query: 2   MSLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKN 61
           M LLD+K+L VEF+T+ G   AV+ ++ ++ +GE +GIVGESGSGKS T  A+MGLL  N
Sbjct: 1   MPLLDIKNLSVEFTTRAGTFRAVDGIDLTVDEGEVVGIVGESGSGKSVTSLAVMGLLGSN 60

Query: 62  GKITGSAK-FEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHK 120
           G++      F G+++L +   +  K+  + +AM+FQ+PMTSLNP   V  Q+ME L +H+
Sbjct: 61  GRVVADRMMFGGRDLLTMSAAQRRKITGKDVAMVFQEPMTSLNPCFTVGFQIMETLRVHE 120

Query: 121 GMGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEP 180
           G+        ++ +LE V IP    R++ +PH+ SGGM QRVMIA+A+ C P+LL+ADEP
Sbjct: 121 GLSGKALRNRAIALLEQVGIPAPETRLSAFPHQLSGGMNQRVMIAIAIACNPRLLVADEP 180

Query: 181 TTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVND 240
           TTALDVT+Q QI++LL +L+RE   A+I+ITHD+GVVA +  +V+VMYAG+  E   V  
Sbjct: 181 TTALDVTIQKQILDLLVQLQRERGMALILITHDMGVVAETAQRVVVMYAGQVAETRPVQS 240

Query: 241 IFYNPSHPYAEGLLSAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKRE 300
           +F  P HPY   LL A+P        LPTIPG  P +   P GC +  RC     RC+ E
Sbjct: 241 LFERPRHPYTGALLDALPERALGKRRLPTIPGMVPGIADRPAGCLFSPRCRFADARCRAE 300

Query: 301 APILLPFGNSRQRACF 316
            P L    + R R CF
Sbjct: 301 RPALFDVDDGRAR-CF 315