Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

 Score =  284 bits (726), Expect = 2e-81
 Identities = 146/317 (46%), Positives = 209/317 (65%), Gaps = 3/317 (0%)

Query: 1   MMSLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAK 60
           M ++L++K L+ E  T +G +T ++D+  SL  GE +G+VGESGSGKS T  +IMGLL K
Sbjct: 1   MSAMLEIKGLKTEVVTDEGNITLIDDITLSLAAGEVMGLVGESGSGKSVTGLSIMGLLDK 60

Query: 61  NGKITGSA-KFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLH 119
             ++TG    F+G+++ +  ++EL  +R  +IAMIFQDPM++LNP +++  Q+MEV+  H
Sbjct: 61  PVQMTGGKILFKGRDLRSASQKELRSIRGNRIAMIFQDPMSTLNPVLRIDTQMMEVVHAH 120

Query: 120 KGMGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADE 179
           + + K  A E +   L  V IP   +R++ YPH+FSGGMRQRV IA+ALL  P ++IADE
Sbjct: 121 ENVSKQVARERARDALGMVGIPSPEERLSAYPHQFSGGMRQRVAIAIALLMSPDVIIADE 180

Query: 180 PTTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVN 239
           PTTALDVT+QAQI+ ++ +L RE  TA+I +THDL VVAG  +K+ VMYAGR +E G   
Sbjct: 181 PTTALDVTIQAQILSIVQKLAREKGTALIWVTHDLSVVAGLAEKLSVMYAGRIVEQGLTA 240

Query: 240 DIFYNPSHPYAEGLLSAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKR 299
           D+   P HPY  GL++++P  +  GE L  I G  P++  +P GC +  RC   T+ C  
Sbjct: 241 DLLRRPLHPYTNGLIASLPAHNKRGERLRQISGTTPSVANMPKGCAFHPRCSFATEIC-L 299

Query: 300 EAPILLPFGNSRQRACF 316
            +P L P    R   CF
Sbjct: 300 NSPALEP-TEGRLLRCF 315