Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  289 bits (739), Expect = 7e-83
 Identities = 149/315 (47%), Positives = 206/315 (65%), Gaps = 2/315 (0%)

Query: 3   SLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNG 62
           S++DV++L+VEF  + G VTA++D++ S++ GE LG+VGESG+GKS T  AI GLL K G
Sbjct: 4   SVIDVRNLKVEFPGRRGTVTALSDISLSIRPGEILGVVGESGAGKSMTGLAIQGLLEKPG 63

Query: 63  KIT-GSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHKG 121
           +I  G      + I  L +R +  +R  +I  IFQDP+TSLNP   V  QL+E +  H  
Sbjct: 64  RIADGEIWLGSRRIDQLDDRAMESIRGREIGAIFQDPLTSLNPLFTVGAQLVETIRQHLP 123

Query: 122 MGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPT 181
           + KA+A   ++++L  V IP    RI  YPH+FSGGMRQRV+IA+AL   PKL+IADEPT
Sbjct: 124 LSKADARARAIQLLRDVGIPSPADRIDHYPHQFSGGMRQRVVIALALSASPKLIIADEPT 183

Query: 182 TALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVNDI 241
           TALDV++QAQI+ LL  L +E  TA++++THD+GV+A + D+V V+YAGR +E G V  +
Sbjct: 184 TALDVSIQAQIISLLRRLCKEKQTAVMLVTHDMGVIAEAADRVAVLYAGRLIEVGPVEQV 243

Query: 242 FYNPSHPYAEGLLSAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKREA 301
            + P HPY +GL+++IP L    E L  I G  P L  +P GC +  RC     RC R+ 
Sbjct: 244 LHEPRHPYTQGLMASIPSLGARVERLNQIDGAMPRLDAIPPGCAFNPRCSFAGPRCLRQR 303

Query: 302 PILLPFGNSRQRACF 316
           P L   GN    AC+
Sbjct: 304 PELETVGNGAS-ACW 317