Pairwise Alignments

Query, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  273 bits (697), Expect = 1e-77
 Identities = 138/269 (51%), Positives = 190/269 (70%), Gaps = 7/269 (2%)

Query: 3   SLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKNG 62
           +LL V+ L VEF    G    V+D++F ++ G T+ +VGESGSGKS T  + M L    G
Sbjct: 8   ALLSVEGLSVEF----GDSRVVDDISFRVEPGRTVAVVGESGSGKSVTSLSTMRLADMMG 63

Query: 63  KI--TGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHK 120
               TG   FEGK++L   ++E+  +R ++IAMIFQ+PMTSLNP   + DQ+ EVL+LH+
Sbjct: 64  ATYPTGKILFEGKDLLKASQKEMRSIRGKEIAMIFQEPMTSLNPVFTIGDQICEVLVLHE 123

Query: 121 GMGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEP 180
            +GK  A E++ ++L+ V++P+A + +  YPH+ SGGMRQRVMIAMAL CRPKLLIADEP
Sbjct: 124 KLGKTAAMEQAKQLLDMVRLPDAAELLHRYPHQLSGGMRQRVMIAMALACRPKLLIADEP 183

Query: 181 TTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVND 240
           TTALDVT+QAQI+ ++ +L+++    ++ ITHD+GVVA   D V+VM+ G+ +E G V D
Sbjct: 184 TTALDVTIQAQILNIMRDLQKKLGMGMVFITHDMGVVAEMADDVVVMWKGKKVEEGPVKD 243

Query: 241 IFYNPSHPYAEGLLSAIPRLDT-EGEVLP 268
           IF NP HPY   LLSA+PRL + EGE  P
Sbjct: 244 IFANPQHPYTRALLSAVPRLGSMEGEAFP 272



 Score =  171 bits (433), Expect = 4e-47
 Identities = 112/285 (39%), Positives = 154/285 (54%), Gaps = 15/285 (5%)

Query: 4   LLDVKDLRVEFSTQDGI-------VTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMG 56
           LL VKDL V F  +  +       ++AV  ++F +  GETL +VGESGSGKS     I  
Sbjct: 304 LLSVKDLFVRFDIRKNLFGKATHRLSAVQKVSFDIHAGETLALVGESGSGKSTIGRTIQQ 363

Query: 57  LLAKNGKITGSAKFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVL 116
           L      ++G   F G+    +   E  ++R E +  IFQDP  SL+P   V   + E +
Sbjct: 364 LQTA---VSGEIAFNGRSYSQMSAAERFRMRQE-VQYIFQDPFASLDPRKTVGFSIAEPI 419

Query: 117 MLHKGMGKAEAFEESV-RMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLL 175
             H  +   +A    V  +LE V +  + +    YPHEFSGG RQRV IA AL   PKL+
Sbjct: 420 NTHGLINDQKAVRRRVDELLERVGL--SSEHAARYPHEFSGGQRQRVCIARALASDPKLI 477

Query: 176 IADEPTTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEY 235
           IADE  +ALDV++QAQI+ L  +L+ E   A + I+HD+ VV     +V V+Y G+ ME 
Sbjct: 478 IADEALSALDVSIQAQIINLFMDLQAERGLAYLFISHDMAVVEKMSHRVAVLYLGQIMEL 537

Query: 236 GSVNDIFYNPSHPYAEGLLSAIPRLD-TEGEVLPTIPGNPPNLLR 279
           GS   +F  P+H Y   LLSA+P  D T    +  I G  PN +R
Sbjct: 538 GSRQQVFETPTHDYTRRLLSAVPVADPTIERRIAMIEGEIPNPVR 582