Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  173 bits (438), Expect = 5e-48
 Identities = 95/267 (35%), Positives = 146/267 (54%), Gaps = 1/267 (0%)

Query: 32  RFMRNKAAMVSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGPSAEHWFGTDALGRDL 91
           + M  +  MVS  VL++I +  +  P+F++    DT        PSAEH  GTD LGRD+
Sbjct: 4   QLMHRRIVMVSALVLLVIAVMAIGAPLFASADPNDTAVLERLKAPSAEHLLGTDELGRDM 63

Query: 92  FVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILYAIPFMFLV 151
           + R + G R SL +  + AL AV+ GT+ G  +GF   R D  +MR+++ + + P + L 
Sbjct: 64  YSRIVHGARYSLAIAALTALGAVVAGTVLGLMAGFFR-RLDAPLMRVVDAMMSFPDILLA 122

Query: 152 IVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCGVSKWNIITRH 211
           I LV   G ++V   +A+  +    +AR+VR  TL +R   F+EA    GV    I+ RH
Sbjct: 123 IALVAILGPSLVNTVLALVLVYTPRVARVVRASTLVVRELLFVEAVRALGVRTSRILWRH 182

Query: 212 IVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANTMEVAIWQLL 271
           I+PN++  + V  + +    IL E+ LSFLG+GV   + +WG ++         A W +L
Sbjct: 183 ILPNLMSPILVQVSFIFAYAILAEAGLSFLGVGVPPEIPTWGTMVAGSQQYAHQAFWVVL 242

Query: 272 FPAAFMVLTLFCFNYVGDGLRDALDPK 298
           FP   ++ T      +GDG+RD LDPK
Sbjct: 243 FPGLAIIFTALSLQLLGDGVRDLLDPK 269