Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., ABC transporter permease from Paraburkholderia sabiae LMG 24235

 Score =  216 bits (549), Expect = 7e-61
 Identities = 109/269 (40%), Positives = 159/269 (59%)

Query: 31  IRFMRNKAAMVSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGPSAEHWFGTDALGRD 90
           +RFMRNKAA+   F++ LI +  VF P  + Y      +  +   PSA HWFGTD LGRD
Sbjct: 25  VRFMRNKAAVFGAFLVALIVVMAVFAPWLTQYDPVQASFMTVRQAPSAAHWFGTDELGRD 84

Query: 91  LFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILYAIPFMFL 150
           +  R L G R SL+ G++   +AV++G   G  +G+ G   D V+ RI + L +IPF+ L
Sbjct: 85  VLSRLLYGARASLLAGVVSVGIAVVLGVPLGLLAGYFGKLVDGVISRIADALLSIPFLIL 144

Query: 151 VIVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCGVSKWNIITR 210
            I L  F G ++     AIG  A     R+ RGQ +S++++E++E A   G+    II R
Sbjct: 145 AIALSAFLGPSLTNAMAAIGISAMPRFIRLTRGQAISVKAEEYVEGARAIGLDHARIILR 204

Query: 211 HIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANTMEVAIWQL 270
           +I+PNVL  + V ++L + S I+ E+ LSFLGLG   P  SWG++L    + +  A W  
Sbjct: 205 YILPNVLPPIIVQASLTVASAIIAEASLSFLGLGQLPPAPSWGSMLNTAKDFVSQAPWMS 264

Query: 271 LFPAAFMVLTLFCFNYVGDGLRDALDPKD 299
           +FP   + L +  FN +GDGLRDALDP++
Sbjct: 265 IFPGIAIFLAVLGFNLLGDGLRDALDPRE 293