Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  214 bits (546), Expect = 2e-60
 Identities = 118/281 (41%), Positives = 169/281 (60%), Gaps = 5/281 (1%)

Query: 21  QGRSLWQDARIRFMRNKAAMVSL-FVLMLITLAVV--FLPMFSAYSYEDTDWYAMHAGPS 77
           Q R+ W++   RF R   A+V+  FVL LI +A+   +L  + A +Y D D  +++ GPS
Sbjct: 22  QIRTPWREFWRRFRRQHVALVAGGFVLALILVAIFARWLTPYDAENYFDYD--SLNNGPS 79

Query: 78  AEHWFGTDALGRDLFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMR 137
            +HWFG D+LGRD+F R LVG +ISL  G+    +  +IGT+ G  +G+  G  DR +MR
Sbjct: 80  LQHWFGVDSLGRDIFSRVLVGAQISLAAGVFAVFIGAIIGTVLGLLAGYYEGWWDRFIMR 139

Query: 138 ILEILYAIPFMFLVIVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAA 197
           I ++L+A P + L I +V   G  I  + VA+   +    AR+VRG TL L+ + FIE+A
Sbjct: 140 ICDVLFAFPGILLAIAVVAVLGSGIANVIVAVAIFSIPAFARLVRGNTLVLKQQTFIESA 199

Query: 198 HVCGVSKWNIITRHIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQ 257
              G S   I+  HI+P  +  + V+ T+ I + I++ + LSFLGLG Q P   WGA+L 
Sbjct: 200 RSIGASDTTILFSHILPGTVSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAMLN 259

Query: 258 EGANTMEVAIWQLLFPAAFMVLTLFCFNYVGDGLRDALDPK 298
           E    M +A    LFPA  + LT+  FN +GDGLRDALDPK
Sbjct: 260 EARADMVIAPHVALFPAVAIFLTVLAFNLLGDGLRDALDPK 300