Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., oligopeptide transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  423 bits (1087), Expect = e-123
 Identities = 205/302 (67%), Positives = 251/302 (83%), Gaps = 2/302 (0%)

Query: 1   MLTKKENLAAIENFSQNLEIQGRSLWQDARIRFMRNKAAMVSLFVLMLITLAVVFLPMFS 60
           M+  K+N   +ENFS+ LE++GRSLWQDAR RFM N+AA+ SL VL+LI L V+  PM S
Sbjct: 1   MMLSKKNSETLENFSEKLEVEGRSLWQDARRRFMHNRAAVASLIVLVLIALFVILAPMLS 60

Query: 61  AYSYEDTDWYAMHAGPSAE--HWFGTDALGRDLFVRTLVGGRISLMVGIMGALVAVLIGT 118
            ++Y+DTDW  M + P  E  H+FGTD+ GRDL VR  +GGRISLMVG+  ALVAV++GT
Sbjct: 61  QFAYDDTDWAMMSSAPDMESGHYFGTDSSGRDLLVRVAIGGRISLMVGVAAALVAVVVGT 120

Query: 119 LYGAASGFIGGRTDRVMMRILEILYAIPFMFLVIVLVTFFGRNIVLIFVAIGAIAWLDMA 178
           LYG+ SG++GG+ D VMMR+LEIL + PFMF VI+LVTFFG+NI+LIFVAIG ++WLDMA
Sbjct: 121 LYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFFGQNILLIFVAIGMVSWLDMA 180

Query: 179 RIVRGQTLSLRSKEFIEAAHVCGVSKWNIITRHIVPNVLGIVAVYSTLLIPSMILTESFL 238
           RIVRGQTLSL+ KEFIEAA V GVS   I+ RHIVPNVLG+V VY++LL+PSMIL ESFL
Sbjct: 181 RIVRGQTLSLKRKEFIEAAQVGGVSTSGIVIRHIVPNVLGVVVVYASLLVPSMILFESFL 240

Query: 239 SFLGLGVQEPMTSWGALLQEGANTMEVAIWQLLFPAAFMVLTLFCFNYVGDGLRDALDPK 298
           SFLGLG QEP++SWGALL +GAN+MEV+ W LLFPA F+V+TLFCFN++GDGLRDALDPK
Sbjct: 241 SFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPK 300

Query: 299 DR 300
           DR
Sbjct: 301 DR 302