Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  422 bits (1086), Expect = e-123
 Identities = 206/302 (68%), Positives = 251/302 (83%), Gaps = 2/302 (0%)

Query: 1   MLTKKENLAAIENFSQNLEIQGRSLWQDARIRFMRNKAAMVSLFVLMLITLAVVFLPMFS 60
           M+  K+N  A+ENFS+ LE++GRSLWQDAR RFM N+AA+ SL VL++I L V   PM S
Sbjct: 1   MMLSKKNSEALENFSEKLEVEGRSLWQDARRRFMHNRAAVASLIVLVIIALFVTLAPMLS 60

Query: 61  AYSYEDTDWYAMHAGPSAE--HWFGTDALGRDLFVRTLVGGRISLMVGIMGALVAVLIGT 118
            ++Y DTDW  M + P  E  H+FGTD+ GRDL VR  +GGRISLMVGI  ALVAV++GT
Sbjct: 61  QFTYFDTDWGMMSSAPDMESGHYFGTDSSGRDLLVRVAIGGRISLMVGIAAALVAVIVGT 120

Query: 119 LYGAASGFIGGRTDRVMMRILEILYAIPFMFLVIVLVTFFGRNIVLIFVAIGAIAWLDMA 178
           LYG+ SG++GG+ D VMMR+LEIL + PFMF VI+LVTFFG+NI+LIFVAIG ++WLDMA
Sbjct: 121 LYGSLSGYLGGKIDSVMMRLLEILNSFPFMFFVILLVTFFGQNILLIFVAIGMVSWLDMA 180

Query: 179 RIVRGQTLSLRSKEFIEAAHVCGVSKWNIITRHIVPNVLGIVAVYSTLLIPSMILTESFL 238
           RIVRGQTLSL+ KEFIEAA V GVS  NI+ RHIVPNVLG+V VY++LL+PSMIL ESFL
Sbjct: 181 RIVRGQTLSLKRKEFIEAAQVGGVSTGNIVVRHIVPNVLGVVVVYASLLVPSMILFESFL 240

Query: 239 SFLGLGVQEPMTSWGALLQEGANTMEVAIWQLLFPAAFMVLTLFCFNYVGDGLRDALDPK 298
           SFLGLG QEP++SWGALL +GAN+MEV+ W LL+PA F+V+TLFCFN++GDGLRDALDPK
Sbjct: 241 SFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLYPAGFLVVTLFCFNFIGDGLRDALDPK 300

Query: 299 DR 300
           DR
Sbjct: 301 DR 302