Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., ABC transporter permease subunit from Dickeya dianthicola ME23

 Score =  172 bits (436), Expect = 8e-48
 Identities = 87/258 (33%), Positives = 141/258 (54%)

Query: 41  VSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGPSAEHWFGTDALGRDLFVRTLVGGR 100
           V + +L L+TL  +F P  + +     +       P  EHW GTD  GRDL  R + G R
Sbjct: 25  VCIVMLSLLTLIALFAPWLAPFDPYSQNVMHRLQPPGPEHWLGTDGFGRDLLSRVIYGTR 84

Query: 101 ISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILYAIPFMFLVIVLVTFFGR 160
            +LM+  +  ++ + IG L G  +G++GG  DR++MR+ +I+ A+P + + + LV   G 
Sbjct: 85  PALMMVALILVITIPIGLLIGVGAGYLGGWVDRLLMRLTDIMLALPGLVIALALVAVLGA 144

Query: 161 NIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCGVSKWNIITRHIVPNVLGIV 220
            ++   +A+   AW   AR  R +T++LR+ EF+ AA + G+  W ++  H++P  L   
Sbjct: 145 GLLHGALALALTAWPQFARQARAETMALRNSEFLAAARMQGIDGWRLMYGHVLPLCLPGA 204

Query: 221 AVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANTMEVAIWQLLFPAAFMVLT 280
              + +   +MIL  + L FLG+G   PM  WGA++ EG++ M    W    P   + LT
Sbjct: 205 LTRAAMTPGNMILAAAGLGFLGVGAPPPMAEWGAMVAEGSSVMLEQWWVATMPGLAIFLT 264

Query: 281 LFCFNYVGDGLRDALDPK 298
              FN +G+ LRD LDP+
Sbjct: 265 SLTFNLLGNALRDKLDPR 282