Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., oligopeptide ABC transporter permease OppC from Dickeya dianthicola ME23

 Score =  426 bits (1094), Expect = e-124
 Identities = 207/302 (68%), Positives = 252/302 (83%), Gaps = 2/302 (0%)

Query: 1   MLTKKENLAAIENFSQNLEIQGRSLWQDARIRFMRNKAAMVSLFVLMLITLAVVFLPMFS 60
           M   K N  A++NFS+ LE++GRSLWQDAR RFM N+AA+ SLFVL +ITL VV  PM +
Sbjct: 1   MFWNKRNREALDNFSEKLEVEGRSLWQDARRRFMHNRAALASLFVLTIITLFVVLGPMVA 60

Query: 61  AYSYEDTDWYAMHAGPS--AEHWFGTDALGRDLFVRTLVGGRISLMVGIMGALVAVLIGT 118
            ++Y DTDW  M + P   ++H+ GTD+ GRDL VR  +GGRISLMVG+  ALVAV++GT
Sbjct: 61  PFNYADTDWNMMSSAPDMLSKHYLGTDSSGRDLLVRVAIGGRISLMVGVAAALVAVIVGT 120

Query: 119 LYGAASGFIGGRTDRVMMRILEILYAIPFMFLVIVLVTFFGRNIVLIFVAIGAIAWLDMA 178
           LYGAASG+IGG+ D VMMR+LEIL + PFMF VI+LVT FG+NI+LIFVAIG ++WLDMA
Sbjct: 121 LYGAASGYIGGKADSVMMRLLEILNSFPFMFFVILLVTLFGQNILLIFVAIGMVSWLDMA 180

Query: 179 RIVRGQTLSLRSKEFIEAAHVCGVSKWNIITRHIVPNVLGIVAVYSTLLIPSMILTESFL 238
           RIVRGQTLSL+ KEFIEAA VCGVS  NI+ RH+VPNVLG+V VY++LL+PSMIL ESFL
Sbjct: 181 RIVRGQTLSLKRKEFIEAALVCGVSTRNIVLRHVVPNVLGVVVVYASLLVPSMILFESFL 240

Query: 239 SFLGLGVQEPMTSWGALLQEGANTMEVAIWQLLFPAAFMVLTLFCFNYVGDGLRDALDPK 298
           SFLGLG QEP++SWGALL +GAN+MEVA W LL+PA F+V+TLFCFN++GDGLRDALDPK
Sbjct: 241 SFLGLGTQEPLSSWGALLNDGANSMEVAPWLLLYPAGFLVVTLFCFNFIGDGLRDALDPK 300

Query: 299 DR 300
           DR
Sbjct: 301 DR 302