Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  179 bits (455), Expect = 5e-50
 Identities = 87/261 (33%), Positives = 146/261 (55%)

Query: 35  RNKAAMVSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGPSAEHWFGTDALGRDLFVR 94
           R  A +  + +L+   L  +  P  + +     D  A    P   H FGTD  GRD+F R
Sbjct: 20  RQPALLAGMTILLCWVLVALLAPWVAPFDPIAQDPSASLQPPGGVHPFGTDNYGRDIFSR 79

Query: 95  TLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILYAIPFMFLVIVL 154
            +   RI L + ++G +    IGTL GA SG++GG TD ++MR+++++ A PF+ L++ +
Sbjct: 80  VMWASRIDLQISLLGVVFPFCIGTLLGALSGYLGGLTDTLVMRVIDVVLAFPFLVLMLAI 139

Query: 155 VTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCGVSKWNIITRHIVP 214
           +   G  ++  ++A+  + W+  AR+VR Q L+LR +++I AA   G S W ++  H++P
Sbjct: 140 IAVLGPGLLSFYIAMAMVGWVSYARLVRAQVLTLRQRDYILAARSLGYSHWRVLFIHLLP 199

Query: 215 NVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANTMEVAIWQLLFPA 274
           N L    V+S      ++L+ + +S+LGLGVQ P+  WG ++ EG + +  A W   FP 
Sbjct: 200 NALTSSLVFSMSDCVLVLLSGAAISYLGLGVQPPLAEWGVMVAEGQSFITTAWWMTTFPG 259

Query: 275 AFMVLTLFCFNYVGDGLRDAL 295
             +VL    F+ + DGL + L
Sbjct: 260 LAIVLLAMGFSLLADGLGERL 280