Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  167 bits (423), Expect = 3e-46
 Identities = 96/282 (34%), Positives = 146/282 (51%), Gaps = 8/282 (2%)

Query: 26  WQDARIRFMRNKAAMVSLFVLMLITLAVVFLPMFSAYSYEDTDWY------AMHAGPSAE 79
           W+  + + + +    + L +L  + L  +  P+ S +     D          H   S  
Sbjct: 27  WRRWQRKILGHHGMTLGLVILGAMVLLALLAPLISPHDPYAQDVSRRLIPPVWHDKGSWA 86

Query: 80  HWFGTDALGRDLFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRIL 139
           H  GTD LGRD   R L G R+SL +G++  ++A  IG   G  +G+ GGR D V+  +L
Sbjct: 87  HLLGTDKLGRDYLSRLLFGARVSLAIGLVSVMLAGTIGIALGVLAGYFGGRVDAVVSYLL 146

Query: 140 EILYAIPFMFLVIVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHV 199
            +  A+P + + + L +  G ++ ++ + +G + W     + R  T  LR  EFI AA  
Sbjct: 147 TVRLALPVILVALALASLVGGSVKVVIMLLGLLLWDRFLIVSRSVTRQLREAEFIAAAQT 206

Query: 200 CGVSKWNIITRHIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEG 259
            G S   I+ R I+PN+LG + V +TL I   +L E+ LSFLGLGVQ PM SWG ++ EG
Sbjct: 207 LGASSLFIMLREILPNLLGPLTVVATLEIAHAVLLEATLSFLGLGVQPPMPSWGLMVAEG 266

Query: 260 ANTMEVAIWQLLFPAAFMVLTLFCFNYVGDGLRD--ALDPKD 299
              M    W ++ P   + L +   N VGDGLRD  ALD ++
Sbjct: 267 KAYMFFQPWVIVIPGVVLALLVLSINLVGDGLRDVTALDGRN 308