Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., ABC transporter permease subunit from Dickeya dianthicola ME23

 Score =  195 bits (496), Expect = 9e-55
 Identities = 103/277 (37%), Positives = 153/277 (55%), Gaps = 1/277 (0%)

Query: 23  RSLWQDARIRFMRNKAAMVSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGPSAEHWF 82
           RS W+D    F+RN  A+ S   ++L+ L  VF P  + ++  + DW A+   PSA HW 
Sbjct: 20  RSPWRDFLHAFIRNPMALASGGFVLLLVLVAVFAPWLAPWNPMEPDWAALGEAPSASHWM 79

Query: 83  GTDALGRDLFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEIL 142
           G D LGRD+  R + G RISL +G++   + +L G + G  +G+ G   D ++MR  ++L
Sbjct: 80  GADDLGRDVMSRIIYGARISLYIGVVSVTLGMLAGIVLGLLAGYYGRGIDMLIMRGCDVL 139

Query: 143 YAIPFMFLVIVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCGV 202
           +A P M L I +V   G  +  + +A+   +    ARIVR  TLSL+   ++EA    G 
Sbjct: 140 FAFPGMLLAIAVVAILGPGLNNVIIAVAVFSVPVFARIVRASTLSLKQAAYVEAVRCAGA 199

Query: 203 SKWNIITRHIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANT 262
               I+ RHI+P  L  V VY T+ I + ILT + LSF+GLG +  +  WG +L    + 
Sbjct: 200 PDRVILLRHILPGTLSNVIVYFTMRIGTSILTAAGLSFIGLGPEPDVPEWGNILAMSRSM 259

Query: 263 MEVAIWQL-LFPAAFMVLTLFCFNYVGDGLRDALDPK 298
           M    W + +FP   +  T+  FN +GD LRD LDPK
Sbjct: 260 MMAGQWHVSVFPGLAIFCTVLAFNLLGDALRDTLDPK 296