Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., ABC transporter permease from Dickeya dadantii 3937

 Score =  181 bits (458), Expect = 2e-50
 Identities = 98/268 (36%), Positives = 143/268 (53%)

Query: 33  FMRNKAAMVSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGPSAEHWFGTDALGRDLF 92
           F  N  AM+ LF+++ + L  +  P  ++Y     +     A PSA HW GTD LGRD+F
Sbjct: 33  FRTNPLAMLGLFIIVAVLLLSLAAPWLTSYDPGFQNLSNRLAAPSAGHWLGTDELGRDVF 92

Query: 93  VRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILYAIPFMFLVI 152
            R L GGR +L + I    +   +G L G  +G+ GG  D+++MR+ +I  A P + L +
Sbjct: 93  SRILYGGRTTLGMVIAVVALTAPLGLLVGCIAGYAGGILDKILMRLTDIFLAFPRLVLAL 152

Query: 153 VLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCGVSKWNIITRHI 212
             V      +    +AI   AW   AR+ R +TL  R  +FI A  + G +   II RHI
Sbjct: 153 AFVAALKPGVESAILAIALTAWPPYARLARAETLQFRHTDFIAACRLTGAAPLRIILRHI 212

Query: 213 VPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANTMEVAIWQLLF 272
           +P  +  + V  TL + S+I+T + L FLG+G Q P   WG ++      +  A W  L 
Sbjct: 213 MPLCVPSLIVRVTLDMSSIIITAASLGFLGMGAQPPSPEWGTMIATARRFLFNAWWVPLV 272

Query: 273 PAAFMVLTLFCFNYVGDGLRDALDPKDR 300
           P   + LT   FN++GDGLRD LDPK+R
Sbjct: 273 PCIAIFLTSLAFNFLGDGLRDLLDPKER 300