Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., ABC transporter permease from Dickeya dadantii 3937

 Score =  166 bits (420), Expect = 6e-46
 Identities = 89/271 (32%), Positives = 145/271 (53%)

Query: 28  DARIRFMRNKAAMVSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGPSAEHWFGTDAL 87
           D   + +     +  + VL+L  L V      +    E     A +  PSA HWFGTD L
Sbjct: 3   DVLKKLLHTPQGIAGVSVLLLALLIVCAGVHLAPADPEAISILARYKAPSAAHWFGTDQL 62

Query: 88  GRDLFVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILYAIPF 147
           GRD+F R LVG R +++  ++   +A++ G++ G AS ++GGR D  +MR ++ + +IP 
Sbjct: 63  GRDIFSRVLVGARTTIVYSLLATALAMVFGSVIGTASAYLGGRMDEGIMRTMDAVMSIPS 122

Query: 148 MFLVIVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCGVSKWNI 207
           +   +++V+  G++ +   +AI       M RI R   L+ R ++++ AA   G S   I
Sbjct: 123 LLFALLIVSTLGQSSLNAVLAITIAFVPGMVRIARSVALAARQQDYVNAAIARGESPGYI 182

Query: 208 ITRHIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANTMEVAI 267
           I R ++PN++  + V ST+ +   I+  + LSFLGLG Q P   WG ++ E       A 
Sbjct: 183 ILREMLPNIVAPIIVESTIRVSFAIMLFATLSFLGLGAQPPQPEWGLMVSEARAYFFNAP 242

Query: 268 WQLLFPAAFMVLTLFCFNYVGDGLRDALDPK 298
           W +L P   + +    FN +GDGLRD L+P+
Sbjct: 243 WMMLIPGLAIAIVAIGFNLLGDGLRDVLNPR 273