Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., ABC transporter permease from Dickeya dadantii 3937

 Score =  184 bits (468), Expect = 2e-51
 Identities = 95/265 (35%), Positives = 142/265 (53%)

Query: 34  MRNKAAMVSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGPSAEHWFGTDALGRDLFV 93
           MRN    +   +++++ L  VF P  + +     D       PSA HWFGTD  GRD+F 
Sbjct: 35  MRNPLTAIGAAIVLVLMLMAVFSPWIATHDPLAQDLANTLQAPSASHWFGTDEFGRDVFS 94

Query: 94  RTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILYAIPFMFLVIV 153
           R + G RI+L +  + ++    IG L G  +G+ GG  D ++MRI +I  + P + L + 
Sbjct: 95  RLVYGSRITLYIVALVSITVGPIGLLLGVVAGYYGGVVDTILMRITDIFISFPSLVLALA 154

Query: 154 LVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCGVSKWNIITRHIV 213
            V   G  +  + +AI   AW  +AR+ R +TLSLR  +F+ A  + G S   I+  HIV
Sbjct: 155 FVAALGPGLEHVVIAITLTAWPPIARLARAETLSLRQADFVSAVKLQGASSLRILLHHIV 214

Query: 214 PNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANTMEVAIWQLLFP 273
           P  L  V +  T+ +  +ILT + L FLGLG Q P   WGA++  G   M    W +  P
Sbjct: 215 PLCLPSVIIRITMNMAGIILTAAGLGFLGLGAQPPDPEWGAMISAGRRYMMECWWLVTIP 274

Query: 274 AAFMVLTLFCFNYVGDGLRDALDPK 298
              +++    FN++GDGLRD LDP+
Sbjct: 275 GLAILINSLAFNFLGDGLRDILDPR 299