Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  183 bits (465), Expect = 4e-51
 Identities = 96/269 (35%), Positives = 149/269 (55%), Gaps = 1/269 (0%)

Query: 32  RFMRNKAAMVSLFVLMLITLAVVFLPMFSAYSYEDTDWYAMHAGPSAEHWFGTDALGRDL 91
           R ++ +     L VL++  L  VF PM + YS            PS  +WFGTD  GRD+
Sbjct: 21  RLLKRRTVAAGLIVLLVFVLLAVFAPMIAPYSPSKLSIVNRLKPPSELYWFGTDEFGRDV 80

Query: 92  FVRTLVGGRISLMVGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILYAIPFMFLV 151
           F RT+  GR+SL+VG     ++ +IG   G  +GF   + D  + R+++ + A P + L 
Sbjct: 81  FSRTIYAGRLSLLVGAAVVALSSIIGITLGLLAGFFQ-KLDTPIARLIDAMMAFPDILLA 139

Query: 152 IVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCGVSKWNIITRH 211
           I LV   G ++  + +A+  +    +ARIVR  TL +R   ++EAA   G+S ++I+TRH
Sbjct: 140 IALVAALGPSLTTVIIALAVVYSPRLARIVRASTLVIRELPYVEAARALGISTFHIMTRH 199

Query: 212 IVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANTMEVAIWQLL 271
           ++ N++  + V  T L  S +L E+ LSFLGLGV   + +WG ++  G   +  A W   
Sbjct: 200 VLRNLVSPILVQCTFLFASAMLAEAGLSFLGLGVSPEIPTWGTMISAGRQYIGQADWMTY 259

Query: 272 FPAAFMVLTLFCFNYVGDGLRDALDPKDR 300
           FP   ++L++     VGDGLRD LDP+ R
Sbjct: 260 FPGFAIILSVLSLQMVGDGLRDMLDPRLR 288