Pairwise Alignments

Query, 300 a.a., oligopeptide ABC transporter permease OppC from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  171 bits (433), Expect = 2e-47
 Identities = 90/270 (33%), Positives = 154/270 (57%), Gaps = 7/270 (2%)

Query: 32  RFMRNKAAMVSLFVLMLITLAVVFLPMFSAYSYED---TDWYAMHAGPSAEHWFGTDALG 88
           RF RN AA++   +L+ + +  VF P  + Y        D+ A H  P  EHWFGTD  G
Sbjct: 23  RFSRNPAAVIGSLILLSVLVLAVFAPWLTPYPKHIGAVVDFRARHMPPDLEHWFGTDKAG 82

Query: 89  RDLFVRTLVGGRISLM--VGIMGALVAVLIGTLYGAASGFIGGRTDRVMMRILEILYAIP 146
           RD+F RT+ G R+SL+  +G++G  ++V +GT+ G  +G+ GG T++++  +  ++ A+P
Sbjct: 83  RDIFSRTIFGLRVSLLLVIGVLG--ISVPVGTVLGLVAGYFGGWTEKLISGLTNVMLAMP 140

Query: 147 FMFLVIVLVTFFGRNIVLIFVAIGAIAWLDMARIVRGQTLSLRSKEFIEAAHVCGVSKWN 206
            + + + +       +    +AI  + W   AR++   + S+ S+++IEAA + G    +
Sbjct: 141 PLVMALAVSNLLEPTLTNAMIAITLLWWTWHARLIYSVSKSIASEDYIEAARLAGAGPLH 200

Query: 207 IITRHIVPNVLGIVAVYSTLLIPSMILTESFLSFLGLGVQEPMTSWGALLQEGANTMEVA 266
           I+ R I+PN + +++V +TL    +IL  + LSFLG GV+ P    G+++ +G   M   
Sbjct: 201 ILFREILPNCVSVISVKTTLDAAFVILFGATLSFLGFGVKPPTPDLGSMVADGRQFMPDF 260

Query: 267 IWQLLFPAAFMVLTLFCFNYVGDGLRDALD 296
            W++L P A ++     FN +GDGLRD  D
Sbjct: 261 WWEVLCPGAAVLYVTLGFNLLGDGLRDMFD 290