Pairwise Alignments

Query, 306 a.a., oligopeptide ABC transporter permease OppB from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., ABC transporter permease subunit from Pectobacterium carotovorum WPP14

 Score =  186 bits (471), Expect = 8e-52
 Identities = 97/307 (31%), Positives = 177/307 (57%), Gaps = 5/307 (1%)

Query: 1   MLKFIAKRIFEAIPTMLVLITISFFLMRYAPGNP--FSSERPLPPEVMANINAKYGLDKP 58
           M  +I +R+ E IP +LV+  + F  ++  PG+P    +      E +     + GL+ P
Sbjct: 1   MFAYIVRRLLEMIPVLLVVSLLVFGFIKLLPGDPARIYAGADATIEAVEAARQQLGLNDP 60

Query: 59  VSEQYLTYLTNIVQGDFGPSFKYKDYTVNELIASALPVSVKIGLAAFVFTVIMGVTVGTI 118
           + +QY+ +L  +  GD G +++ +   ++ +  S +P ++ + LA FV++V++G+ +G +
Sbjct: 61  LPQQYVHWLGGMFSGDLGVTYRTQQPVIDVISKSFMP-TMWLALAGFVWSVLLGLLIGVV 119

Query: 119 AALKQNTWIDYTIMSTAMLGVVMPSFVLAPVLIYIFAIQFSLFPAGGWQDGGFEYMALPV 178
           +ALK+  W D+T+MS A+ G+ MP F L  +LI   A+ F +F   G+       + LP 
Sbjct: 120 SALKRGKWQDWTLMSFAVGGISMPPFWLGLLLIQFVAMPFGVFSVSGFNQPSD--IILPA 177

Query: 179 LGMSLLYVATFARITRGSMIETLNSNFIRTARAKGLSYGYIVVKHALKPALLPVVSYMGP 238
           L +     A  AR TR + +E    +++RTAR+KGL    +  KH ++ AL+PV++ +G 
Sbjct: 178 LTLGASVAAVMARFTRSAFLEVAQEDYVRTARSKGLRNRLVTWKHVMRNALIPVITMLGL 237

Query: 239 AFVGIITGSVVIETIFGLPGIGKLFVNAAFNRDYSLVMGVTILIGFLFILFNAIVDILLA 298
            F  ++ GS+V+E++F  PG+G L + +   +D  ++  + +L  F FI+ N +VD+L A
Sbjct: 238 QFGFLLGGSIVVESVFSWPGLGWLLIESIKTQDQPVIQALVMLFVFEFIVINLLVDLLYA 297

Query: 299 YIDPKIR 305
            ++P IR
Sbjct: 298 VVNPAIR 304