Pairwise Alignments

Query, 306 a.a., oligopeptide ABC transporter permease OppB from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., oligopeptide permease ABC transporter membrane protein (NCBI) from Escherichia coli BW25113

 Score =  423 bits (1087), Expect = e-123
 Identities = 208/306 (67%), Positives = 249/306 (81%)

Query: 1   MLKFIAKRIFEAIPTMLVLITISFFLMRYAPGNPFSSERPLPPEVMANINAKYGLDKPVS 60
           MLKFI +R  EAIPT+ +LITISFF+MR APG+PF+ ER LPPEVMANI AKY L+ P+ 
Sbjct: 1   MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPEVMANIEAKYHLNDPIM 60

Query: 61  EQYLTYLTNIVQGDFGPSFKYKDYTVNELIASALPVSVKIGLAAFVFTVIMGVTVGTIAA 120
            QY +YL  +  GDFGPSFKYKDY+VN+L+AS+ PVS K+G AAF   VI+GV+ G IAA
Sbjct: 61  TQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGVIAA 120

Query: 121 LKQNTWIDYTIMSTAMLGVVMPSFVLAPVLIYIFAIQFSLFPAGGWQDGGFEYMALPVLG 180
           LKQNT  DYT+M  AM GVV+PSFV+AP+L+ IFAI     P GGW  G  ++M LP++ 
Sbjct: 121 LKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGWNGGALKFMILPMVA 180

Query: 181 MSLLYVATFARITRGSMIETLNSNFIRTARAKGLSYGYIVVKHALKPALLPVVSYMGPAF 240
           +SL Y+A+ ARITRGSMIE L+SNFIRTARAKGL    I+++HALKPALLPV+SYMGPAF
Sbjct: 181 LSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYMGPAF 240

Query: 241 VGIITGSVVIETIFGLPGIGKLFVNAAFNRDYSLVMGVTILIGFLFILFNAIVDILLAYI 300
           VGIITGS+VIETI+GLPGIG+LFVN A NRDYSLV+ +TIL+G L ILFNAIVD+L A I
Sbjct: 241 VGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVLYAVI 300

Query: 301 DPKIRY 306
           DPKIRY
Sbjct: 301 DPKIRY 306