Pairwise Alignments

Query, 306 a.a., oligopeptide ABC transporter permease OppB from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  189 bits (481), Expect = 5e-53
 Identities = 101/306 (33%), Positives = 180/306 (58%), Gaps = 4/306 (1%)

Query: 1   MLKFIAKRIFEAIPTMLVLITISFFLMRYAPGNPFSSERP-LPPEVMANINAKYGLDKPV 59
           M+K++ +R+  A+  +  +  +SF L+  +     +   P    E +A I  + GLDKP+
Sbjct: 1   MVKYVFQRLLVALAVLFTVAAVSFSLLHLSGDLATAIAGPDATAETIAQIRVQNGLDKPL 60

Query: 60  SEQYLTYLTNIVQGDFGPSFKYKDYTVNELIASALPVSVKIGLAAFVFTVIMGVTVGTIA 119
             Q+  ++ + +Q DFG SF Y + TV EL+   +PV++K+G  + +  + + + +G +A
Sbjct: 61  LSQFSRWMWSALQLDFGRSF-YFENTVMELVGQRMPVTLKLGGVSLLLALTVAIPLGVLA 119

Query: 120 ALKQNTWIDYTIMSTAMLGVVMPSFVLAPVLIYIFAIQFSLFPAGGWQDGGFEYMALPVL 179
           A+ ++TW+D   M  +++G  MP+F  A VLI IFA+     P  G  +G +++  LP +
Sbjct: 120 AVFRDTWVDRFAMLVSVVGQAMPNFWFALVLILIFAVGLKWLPVAG--NGSWQHFVLPAV 177

Query: 180 GMSLLYVATFARITRGSMIETLNSNFIRTARAKGLSYGYIVVKHALKPALLPVVSYMGPA 239
            +    + +  R+TR  M++ L S++IRTARAKGLS   +VVKH L+ A++PVV+     
Sbjct: 178 ALGYYAMPSLMRLTRSGMLDVLGSDYIRTARAKGLSAFKVVVKHGLRNAIIPVVALATVE 237

Query: 240 FVGIITGSVVIETIFGLPGIGKLFVNAAFNRDYSLVMGVTILIGFLFILFNAIVDILLAY 299
              ++ GSVVIE++F L G+G+L  ++    D+ +V  + ++I   +I    + D+L A 
Sbjct: 238 LGFMLGGSVVIESVFSLQGLGQLAWDSIARNDFPVVQAIVLIIAVFYIGLTFLADVLNAL 297

Query: 300 IDPKIR 305
           +DP++R
Sbjct: 298 LDPRLR 303