Pairwise Alignments

Query, 306 a.a., oligopeptide ABC transporter permease OppB from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., ABC transporter permease subunit from Dickeya dianthicola ME23

 Score =  194 bits (492), Expect = 3e-54
 Identities = 103/307 (33%), Positives = 178/307 (57%), Gaps = 5/307 (1%)

Query: 1   MLKFIAKRIFEAIPTMLVLITISFFLMRYAPGNP--FSSERPLPPEVMANINAKYGLDKP 58
           M  +I +R+ E IP +LV+  + F  ++  PG+P    +    P E +     + GL+ P
Sbjct: 1   MFVYIVRRLLEMIPVLLVISLLVFGFIKLLPGDPARIYAGPDAPIEAVEAARERLGLNDP 60

Query: 59  VSEQYLTYLTNIVQGDFGPSFKYKDYTVNELIASALPVSVKIGLAAFVFTVIMGVTVGTI 118
           + +QYL +L  +V GD G +++ +   ++ +  S +P ++ + LA F ++V++G+ +G  
Sbjct: 61  LPQQYLNWLDGLVHGDLGITYRTQQPVLSVIQKSFMP-TLWLALAGFAWSVLLGLLIGVF 119

Query: 119 AALKQNTWIDYTIMSTAMLGVVMPSFVLAPVLIYIFAIQFSLFPAGGWQDGGFEYMALPV 178
           AALK+  W D+++MS A+ G+ MP F L  +LI   A+ F +F   G+       + LP 
Sbjct: 120 AALKRGKWQDWSLMSLAVGGISMPPFWLGLLLIQFVAMPFGVFSVSGYNKPAD--IILPA 177

Query: 179 LGMSLLYVATFARITRGSMIETLNSNFIRTARAKGLSYGYIVVKHALKPALLPVVSYMGP 238
           L +     A  AR TR + +E    +++RTARAKGL    IV KH ++ AL+PV++ +G 
Sbjct: 178 LTLGASVAAVMARFTRSAFLEVTQEDYVRTARAKGLRQRLIVWKHVMRNALIPVITMLGL 237

Query: 239 AFVGIITGSVVIETIFGLPGIGKLFVNAAFNRDYSLVMGVTILIGFLFILFNAIVDILLA 298
            F  ++ GS+V+E++F  PG+G L + +   +D  ++  + +L  F FIL N +VD+L A
Sbjct: 238 QFGFLLGGSIVVESVFNWPGLGWLLIESIKTQDQPVIQALVMLFVFEFILINLLVDLLYA 297

Query: 299 YIDPKIR 305
            ++P IR
Sbjct: 298 VVNPAIR 304