Pairwise Alignments

Query, 306 a.a., oligopeptide ABC transporter permease OppB from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., dipeptide/heme ABC transporter permease from Escherichia coli BL21

 Score =  199 bits (506), Expect = 8e-56
 Identities = 112/338 (33%), Positives = 189/338 (55%), Gaps = 33/338 (9%)

Query: 1   MLKFIAKRIFEAIPTMLVLITISFFLMRYAPGNP---FSSERPLPPEVMANINAKYGLDK 57
           ML+FI +R+   IPT + +  ++F  +   PG+P    + ER + PE  A + A+ GLDK
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLDK 60

Query: 58  PVSEQYLTYLTNIVQGDFGPSFKYKDYTVNELIASALPVSVKIGLAAFVFTVIMGVTVGT 117
           P+ +QYL Y+  ++ GD G S K +   V E        ++++G+ A +F   +G+ VG 
Sbjct: 61  PMWQQYLHYIWGVMHGDLGISMKSR-IPVWEEFVPRFQATLELGVCAMIFATAVGIPVGV 119

Query: 118 IAALKQNTWIDYTIMSTAMLGVVMPSFVLAPVLIYIFAIQFSLFPAGG------------ 165
           +AA+K+ +  D+T +  A+ G  MP F    +LI + ++ ++L P  G            
Sbjct: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLDDSN 179

Query: 166 ------------W-QDGGF----EYMALPVLGMSLLYVATFARITRGSMIETLNSNFIRT 208
                       W +DG F     +M LP + +  + +A   R+TR SM+E L  ++IRT
Sbjct: 180 PLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDYIRT 239

Query: 209 ARAKGLSYGYIVVKHALKPALLPVVSYMGPAFVGIITGSVVIETIFGLPGIGKLFVNAAF 268
           ARAKGL+   +++ HAL+ A+LPVV+ +G     ++ G+++ ETIF  PG+G+  ++A  
Sbjct: 240 ARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDALQ 299

Query: 269 NRDYSLVMGVTILIGFLFILFNAIVDILLAYIDPKIRY 306
            RDY +V G  +L+  + IL N +VD+L   ++P+IR+
Sbjct: 300 RRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIRH 337