Pairwise Alignments

Query, 306 a.a., oligopeptide ABC transporter permease OppB from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  329 bits (844), Expect = 4e-95
 Identities = 153/306 (50%), Positives = 218/306 (71%)

Query: 1   MLKFIAKRIFEAIPTMLVLITISFFLMRYAPGNPFSSERPLPPEVMANINAKYGLDKPVS 60
           M+ FI +R+  A+PT+ +++TISFFLMR+APG PF+ ERPLPP+ M N+   Y LD+P+ 
Sbjct: 1   MISFILRRLASAVPTLFIVVTISFFLMRFAPGGPFNLERPLPPQTMENLMRTYHLDEPLW 60

Query: 61  EQYLTYLTNIVQGDFGPSFKYKDYTVNELIASALPVSVKIGLAAFVFTVIMGVTVGTIAA 120
            QYL YL N V GDFGPS+ YKD TV +LI   LP S+++G  A +  ++ GV  GT+AA
Sbjct: 61  RQYLIYLRNAVTGDFGPSYIYKDNTVAQLIGKGLPYSLELGSYALLLALVGGVLAGTLAA 120

Query: 121 LKQNTWIDYTIMSTAMLGVVMPSFVLAPVLIYIFAIQFSLFPAGGWQDGGFEYMALPVLG 180
           L+QN+  D+++MS + +G+ +P+FV+APVL  +FA+   L PAG W DG   Y+ LP++ 
Sbjct: 121 LRQNSAFDFSLMSISTVGITVPNFVVAPVLTLVFAVILGLLPAGSWGDGSLRYLILPMIA 180

Query: 181 MSLLYVATFARITRGSMIETLNSNFIRTARAKGLSYGYIVVKHALKPALLPVVSYMGPAF 240
           ++L  +A  AR+TRG+MIE L  + IRTA+A GL    +VV HA++ A+LPVVSY+ P  
Sbjct: 181 LALPQLAVIARLTRGAMIEALRMDHIRTAKAYGLPARSVVVLHAMRAAMLPVVSYLAPCA 240

Query: 241 VGIITGSVVIETIFGLPGIGKLFVNAAFNRDYSLVMGVTILIGFLFILFNAIVDILLAYI 300
             ++TGS VIETIF +PG+G+ FV  A NRDY+LVMG  +L+    I+FN +VDIL   +
Sbjct: 241 AALLTGSAVIETIFTIPGVGRYFVLGAINRDYTLVMGTVVLVAIFVIVFNLLVDILYGLL 300

Query: 301 DPKIRY 306
           DP++R+
Sbjct: 301 DPRVRH 306