Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  137 bits (345), Expect = 1e-36
 Identities = 111/445 (24%), Positives = 197/445 (44%), Gaps = 34/445 (7%)

Query: 83  VVPGVAESWETT-DNKTFTFHIRKDAKWSNGD------PVTAHDFVYSFQRAVDPATASP 135
           V PG+A SW+ + D  T+TFH+R   K+   D         A D +++F R +D  +   
Sbjct: 71  VEPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFNRLLDAQSPFR 130

Query: 136 YSWYME---YTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYFV--MMMGHTT 190
            ++  E   +T M     I + +K         +DDHT+ F L      FV  + M   +
Sbjct: 131 QAYPSESPYFTDMGLNTTIKSVDK---------LDDHTVRFNLNNVDASFVQNLAMSFAS 181

Query: 191 VKPI-HKATVEKFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDDKNTVLNKVT 249
           V+   + A + K G      +  VG G +V  ++  + ++    N QYW  ++  L+ + 
Sbjct: 182 VQSAEYAAQLLKQGKAEEINQKPVGTGPFVFKRYQKDSQIRYVANKQYWKPEDVKLDNLV 241

Query: 250 YLPIENQVAEMNRFLSGEIQITNELPLEHFKRLKKEHPESVQVQGQLCTYYYGFNNKKPP 309
           +    +  + + +  +GE Q++        + +K++    V  Q      +  +N   PP
Sbjct: 242 FAITPDAASRLQKLKAGECQVSGYPRPADIEVMKQDPNLHVLQQAGFNLGFLAYNVTHPP 301

Query: 310 FDDVRVRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGKMTQKERIAE 369
            D ++VR+AL  AID+  +  A+     + A    P     + P +        K     
Sbjct: 302 LDQLKVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSYDPTIKDAPYDPTK----- 356

Query: 370 AKKLLEEAGYNKSNPLKF---TLLYNTSENHKKIATAIQSMWKTSLGVDIALENQEWKTY 426
           AK LL+EAG      +     T+   ++ N +  A  IQ  W+  +G+   + + EW  Y
Sbjct: 357 AKALLKEAGVAPGTTVNLWAMTVQRASNPNARMSAQMIQQDWE-KVGIKANIVSYEWGEY 415

Query: 427 LDTRRQGNFDVTRAGWCGDYNEASSFLTLMLSSNT---SNDPQYHSAEYDAVIEKAKTST 483
           +   + G  D    GW GD  +  ++L ++ S      SN  ++ +  YD ++++AK S 
Sbjct: 416 IKRAKNGEHDAMIYGWTGDNGDPDNWLGVLYSCAAVKGSNYAKWCNPAYDKLVQQAKVSN 475

Query: 484 SEEERQKLYADAEKLLARDMPIAPI 508
             E+R K Y  A+K+L   +PI PI
Sbjct: 476 DREQRIKWYQQAQKILKEQVPITPI 500