Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  139 bits (350), Expect = 3e-37
 Identities = 128/507 (25%), Positives = 225/507 (44%), Gaps = 55/507 (10%)

Query: 16  LAVATTSFTSFAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEGVPESNVIRDLLEGLV 75
           LA AT +  S  A +     +  +     G   +  + DP K+    ++ V  ++ + LV
Sbjct: 9   LAAATLTAWSLTAGLAQAAGVLTI-----GCREDSTTFDPIKSAQNRDTWVFANVYDTLV 63

Query: 76  NQDANGNVV-PGVAESWETT-DNKTFTFHIRKDAKWSNGDPVTAHDFVYSFQRAVDPATA 133
             D  G  + PG+AESW+ + D  T+TF +R DAK+S+G  +TA D  +S  R  D   +
Sbjct: 64  RVDNLGTKMEPGLAESWDISKDGLTYTFKLR-DAKFSDGSAITADDAAFSLLRIRDNKAS 122

Query: 134 SPYSWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYFVMMMGHTTVKP 193
               W   +  +  AK               A D  TLV  L+T    F+  +   TV  
Sbjct: 123 L---WADPFNLINTAK---------------ASDPKTLVVTLKTPAVAFLSQLASPTVSI 164

Query: 194 IHKATVEKFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDDKNTVLNKVTYLPI 253
           + +  + K G+     EN V +GA+ +D+W   +R+ LK+NP +W  KN  L+ V ++ +
Sbjct: 165 LSEKAMTKMGED-AYSENPVTSGAFTVDEWRKGDRVILKKNPNFWQAKNVSLDGVEWVSV 223

Query: 254 ENQVAEMNRFLSGEIQITNELPLEHFKRLKKEHPESVQVQGQLCTYYYGFNNKKPPFDDV 313
            +    M    + E+     +P    + LKK+    +         +   N++       
Sbjct: 224 TDDNTRMRMVQNNELDTAIFVPFSRVEELKKDKNVVIHADPSTREDHLLINHEHGLLAKP 283

Query: 314 RVRKALSYAIDR-DVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGKMTQKERIAE--- 369
            VR+AL  AID+  +V  A  GQG          +   + P+   Y      +R  +   
Sbjct: 284 EVRQALDMAIDKQSLVKTATYGQG---------TVAYSYIPKGSLYHYANNLQRPYDPTA 334

Query: 370 AKKLLEEAGYNKSNPLKFTLLYNT-SENHKKIATAIQSMWKTSLGVDIALE----NQEWK 424
           AKKLLE+AG   +  LK   + N  +E  ++IA  I+      +GV   L+     Q W+
Sbjct: 335 AKKLLEQAG---AKDLKLNYVVNAGNEADEQIAVIIKDQ-LAKVGVTANLQKVDPTQSWQ 390

Query: 425 TYLDTRRQGNFDVTRAGWCGDYNEASSFLTLMLSSNTSND--PQYHSAEYDAVIEKAKTS 482
             +D    G +D++   W  D  +     T +L  +T+ +   +Y + +  A++ +A+  
Sbjct: 391 MLVD----GEYDISVMYWTNDILDPDQKTTFVLGHDTNQNYMTRYKNDKVKALVAQARIE 446

Query: 483 TSEEERQKLYADAEKLLARDMPIAPIY 509
               +R+++Y + +KL  +D+    +Y
Sbjct: 447 ADPVKREQMYVELQKLAKQDVNWIDLY 473