Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., oligopeptide ABC transporter substrate-binding protein OppA from Serratia liquefaciens MT49

 Score =  623 bits (1607), Expect = 0.0
 Identities = 298/539 (55%), Positives = 388/539 (71%), Gaps = 4/539 (0%)

Query: 6   ITQALLLGAGLAVA---TTSFTSFAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEGVP 62
           IT+  +L AG+  A   T + ++FAA+VPAG +LA  QE+V+ NG+EV SLDPHK EGVP
Sbjct: 4   ITKKTILAAGIIAALGITATGSAFAADVPAGVQLADKQEIVKNNGSEVQSLDPHKIEGVP 63

Query: 63  ESNVIRDLLEGLVNQDANGNVVPGVAESWETTDNKTFTFHIRKDAKWSNGDPVTAHDFVY 122
           E+NV RDL+EGL N   +G++VPGVAESW+  D K +TFH+RKDAKWSNG PVTA DFVY
Sbjct: 64  ENNVTRDLMEGLANNGLDGSIVPGVAESWDNKDFKVWTFHLRKDAKWSNGKPVTAQDFVY 123

Query: 123 SFQRAVDPATASPYSWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYF 182
           S+QR VDP TASPY+ Y++Y  ++N  ++IAG+KDKSTLG KA+DDHT    L   VPY 
Sbjct: 124 SWQRVVDPKTASPYASYLQYAHVENVDDVIAGKKDKSTLGVKAIDDHTFQVTLTEPVPYL 183

Query: 183 VMMMGHTTVKPIHKATVEKFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDDKN 242
           V M  H  +KP++K  VEKFG++WT P N+V NGAY L  WVVNER+ L+RNP+YWD+  
Sbjct: 184 VEMTPHYAMKPVYKEAVEKFGEKWTLPANYVSNGAYKLKDWVVNERIVLERNPEYWDNAK 243

Query: 243 TVLNKVTYLPIENQVAEMNRFLSGEIQIT-NELPLEHFKRLKKEHPESVQVQGQLCTYYY 301
           T++NKVT+LPI ++V ++NR+ +GEI +T N +P+E F++LKKE P+ V V   LCTYYY
Sbjct: 244 TIINKVTFLPISSEVTDVNRYRTGEIDMTYNNMPIELFQKLKKEIPKEVHVDPYLCTYYY 303

Query: 302 GFNNKKPPFDDVRVRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGKM 361
             NN+K PF D RVR+AL   +DRD++++ +  QG  PAY  TP  T G     P +   
Sbjct: 304 EINNQKAPFTDARVREALKLGLDRDIITNKVKNQGDLPAYSFTPPYTDGAKLTPPEWFSW 363

Query: 362 TQKERIAEAKKLLEEAGYNKSNPLKFTLLYNTSENHKKIATAIQSMWKTSLGVDIALENQ 421
           TQ++R   AKKLL +AGY    PL F+LLYNTS+ HKK+A A  S+WK +LGVD+ L NQ
Sbjct: 364 TQEKRNEVAKKLLADAGYGPGKPLTFSLLYNTSDLHKKLAIAAASIWKKNLGVDVKLVNQ 423

Query: 422 EWKTYLDTRRQGNFDVTRAGWCGDYNEASSFLTLMLSSNTSNDPQYHSAEYDAVIEKAKT 481
           EWKT+LDTR QG +DV RAGWC DYNE SSFL +MLS ++SN P Y SAE+D ++    T
Sbjct: 424 EWKTFLDTRHQGTYDVARAGWCADYNEPSSFLNMMLSDSSSNTPHYKSAEFDKLMANVLT 483

Query: 482 STSEEERQKLYADAEKLLARDMPIAPIYQYVRSRLVSPTVGGYPSNNAEDKIYAKDLYI 540
           + ++EER +LY  AE  L +D  I P+Y YV +RLV P VGGY   +  D +Y K+LYI
Sbjct: 484 AKTKEERAELYQKAEVQLDKDSAIVPVYYYVNARLVKPYVGGYTGKDPLDNVYDKNLYI 542