Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., oligopeptide ABC transporter substrate-binding protein OppA from Serratia liquefaciens MT49

 Score =  449 bits (1156), Expect = e-130
 Identities = 237/534 (44%), Positives = 334/534 (62%), Gaps = 11/534 (2%)

Query: 10  LLLGAGLAVATTSFTSFAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEGVPESNVIRD 69
           L L AG+AV        AA VPAG +LA  QELVR NG E A+LDP+  E   E  +  D
Sbjct: 30  LSLQAGVAVQ-------AAEVPAGVQLAAKQELVRANGYEPATLDPNLAESNVEFYIFND 82

Query: 70  LLEGLVNQDANGNVVPGVAESWETTDNKTFTFHIRKDAKWSNGDPVTAHDFVYSFQRAVD 129
           L EGL+    NG V+P +A  WET     +TFH+R +AKWSNGDPVTA DFV+S++R  D
Sbjct: 83  LFEGLLRVGKNGEVIPALATKWETKGT-VWTFHLRPEAKWSNGDPVTADDFVFSWRRLTD 141

Query: 130 PATASPYSWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYFVMMMGHT 189
           P TASPY  Y+    + NA EI AG K  S LG KA+D HTL   L     Y +  + H 
Sbjct: 142 PKTASPYGSYLASAYVLNAAEINAGGKPPSELGVKALDAHTLQVTLAEPNSYLLKQLVHF 201

Query: 190 TVKPIHKATVEKFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDDKNTVLNKVT 249
            V P+++  VE++G  WT+P+NFVGNGA+ L +WVVNE++ ++RN QYWD+ +TVLNKVT
Sbjct: 202 PVLPVNRKVVEQYGKNWTQPQNFVGNGAFKLAQWVVNEKVVVERNTQYWDNAHTVLNKVT 261

Query: 250 YLPIENQVAEMNRFLSGEIQITNELPLEHFKRLKKE-HPESVQVQGQLCTYYYGFNNKKP 308
           +LP++    E+ RF +GEI++    P E +++LKK    E +     L T Y+ FNN++P
Sbjct: 262 FLPLQG-FPEVARFRAGEIELGYSAPPELYQQLKKNLGDEQLVTYPLLSTSYFAFNNRQP 320

Query: 309 PFDDVRVRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGKMTQKERIA 368
           PF+DVRVR+AL+ A+D+ V++  +LG GQ+PA+  TP    GF+ +       +Q++RIA
Sbjct: 321 PFNDVRVRQALNLALDKQVIAGKVLGYGQQPAWTFTPTGAGGFTLQAGVAAGWSQEQRIA 380

Query: 369 EAKKLLEEAGYNKSNPLKFTLLYNTSENHKKIATAIQSMWKTSLGVDIALENQEWKTYLD 428
           +AKKLL EAG+N  +PL+FTLLY+     KKI  A  +MWK +LG ++ L+NQE K  LD
Sbjct: 381 QAKKLLAEAGFNAQHPLRFTLLYSNDATIKKIVIAASAMWKKNLGAEVTLQNQERKVVLD 440

Query: 429 TRRQGNFDVTRAGWCGDYNEASSFLTLMLSSNTSNDPQYHSAEYDAVIEKAKTSTSEEER 488
               G +    + W  DYN+ S+FL +  S+++ N  +Y +  YD ++ +A  + S E+ 
Sbjct: 441 NINNGQYSAAFSRWLADYNDPSTFLNVFRSTSSENSAKYANEHYDRLLHQATAAQSPEQV 500

Query: 489 QKLYADAEKLLARDMPIAPIYQYVRSRLVSPTVGGYPSNNAEDKIYAKDLYIKA 542
           Q+    AE +LA D P+AP+Y    + LV P V G      +  +Y K++YI A
Sbjct: 501 QQASQQAEDVLAVDTPVAPVYYEANATLVKPYVKGIDFTR-QGPLYDKNVYILA 553