Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 526 a.a., Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  138 bits (347), Expect = 6e-37
 Identities = 118/465 (25%), Positives = 199/465 (42%), Gaps = 42/465 (9%)

Query: 83  VVPGVAESWETT-DNKTFTFHIRKDAKWSNGDP------VTAHDFVYSFQRAVDPATASP 135
           V+PG+AE W+ + D KT+TFH+RK  KW +         + A D V+SF R  +    +P
Sbjct: 65  VIPGLAEKWDISEDGKTYTFHLRKGVKWQSSKDFKPTRELNADDVVFSFDRQKNEQ--NP 122

Query: 136 Y----SWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYFVMMMGHTTV 191
           Y        EY +     ++I+          K VDDHT+ F L      F+  +     
Sbjct: 123 YHKVSGGSYEYFEGMGLPDLISE--------VKKVDDHTVQFVLTRPEAPFLADLAMDFA 174

Query: 192 KPIHKATVE---KFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDDKNTVLNKV 248
             + K   +   K G       N VG G + L ++  + R+  K    YW  K  + +++
Sbjct: 175 SILSKEYADNMLKAGTPEKVDLNPVGTGPFQLVQYQKDSRILYKAFDGYWGTKPQI-DRL 233

Query: 249 TYLPIENQVAEMNRFLSGEIQITNELPLEHFKRLKKEHPESVQVQGQLCTYYYGFNNKKP 308
            +    +      +    E Q+          R+K++   ++  Q  L   Y  +N +K 
Sbjct: 234 VFSITPDASVRYAKLQKNECQVMPYPNPADIARMKEDKNINLMEQAGLNVGYLSYNVQKK 293

Query: 309 PFDDVRVRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGKMTQKERIA 368
           P DDV+VR+AL+YA++++ +  A+       A  L P    G++ ++  YG   +K    
Sbjct: 294 PLDDVKVRQALTYAVNKEAIIKAVYQGAGVAAKNLIPPTMWGYNDDIKDYGYDPEK---- 349

Query: 369 EAKKLLEEAGYNKSNPLKFTLL-----YNTSENHKKIATAIQSMWKTSLGVDIALENQEW 423
            AK LL+EAG  K   +    +     YN   N +++A  IQ+ W   +GV   +   EW
Sbjct: 350 -AKALLKEAGLEKGFTIDLWAMPVQRPYN--PNARRMAEMIQADW-AKIGVQAKIVTYEW 405

Query: 424 KTYLDTRRQGNFDVTRAGWCGDYNEASSFLTLMLSSNT----SNDPQYHSAEYDAVIEKA 479
             YL   + G       GW GD  +  +F   + S +     SN  ++    ++ +I+ A
Sbjct: 406 GEYLKRAKDGEHQTVMMGWTGDNGDPDNFFATLFSCDAAQQGSNYSKWCYKPFEDLIQPA 465

Query: 480 KTSTSEEERQKLYADAEKLLARDMPIAPIYQYVRSRLVSPTVGGY 524
           + +    +R +LY  A+ ++    P   I        V   V GY
Sbjct: 466 RATDDHNKRIELYKQAQVVMHDQAPALIIAHSTVYEPVRKEVKGY 510