Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 537 a.a., Periplasmic Murein Peptide-Binding Protein MppA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  527 bits (1357), Expect = e-154
 Identities = 262/525 (49%), Positives = 348/525 (66%), Gaps = 2/525 (0%)

Query: 17  AVATTSFT-SFAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEGVPESNVIRDLLEGLV 75
           A+  +SF+ ++AA+VP GT LA  QELVR    E ASLDP K  G+PE  VIRDL EGLV
Sbjct: 11  ALLVSSFSLAYAADVPGGTVLAEKQELVRHIKDEPASLDPAKAVGLPEIQVIRDLFEGLV 70

Query: 76  NQDANGNVVPGVAESWETTDNKTFTFHIRKDAKWSNGDPVTAHDFVYSFQRAVDPATASP 135
           NQ+  G ++PGVA  W++ DN+ +TF +R DA+W++G PVTA DFVYS+QR VDP T SP
Sbjct: 71  NQNEKGEIIPGVASQWKSNDNRIWTFTLRDDAQWADGTPVTAQDFVYSWQRLVDPKTLSP 130

Query: 136 YSWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVPYFVMMMGHTTVKPIH 195
           ++W+     + NA+ II G+     LG  AVD HTL  +L+  +P+F  +       P+ 
Sbjct: 131 FAWFAALAGITNAQAIIDGKVTPDQLGVSAVDAHTLRVQLDKPLPWFASLTASFAFYPVQ 190

Query: 196 KATVEKFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDDKNTVLNKVTYLPIEN 255
           KA VE  G  W KP   +GNGAYVL + VVNE+L +  N  YWD+  TVL KVT+LPI  
Sbjct: 191 KANVES-GKDWMKPGKLIGNGAYVLKERVVNEKLVVVPNTHYWDNAKTVLQKVTFLPINQ 249

Query: 256 QVAEMNRFLSGEIQITNELPLEHFKRLKKEHPESVQVQGQLCTYYYGFNNKKPPFDDVRV 315
           + A   R+L+G+I IT   P   +++L K+ P  V    QL TYYY FN +K P  D RV
Sbjct: 250 ESAATKRYLAGDIDITESFPKNMYQKLLKDIPGQVYTPPQLGTYYYAFNTQKGPTADSRV 309

Query: 316 RKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYGKMTQKERIAEAKKLLE 375
           R ALS  IDR ++++ +LG G+KPA+  TP++TAGF+P+   + +M+Q+E  A+AK LL 
Sbjct: 310 RLALSMTIDRRLMAEKVLGTGEKPAWHFTPDVTAGFTPDPSPFEQMSQEELNAQAKTLLR 369

Query: 376 EAGYNKSNPLKFTLLYNTSENHKKIATAIQSMWKTSLGVDIALENQEWKTYLDTRRQGNF 435
            AGY    PLK TLLYNTSENH+KIA A+ SMWK +LGVD+ L+NQEWKTY+D+R  GNF
Sbjct: 370 AAGYGSQKPLKLTLLYNTSENHQKIAIAVASMWKKNLGVDVKLQNQEWKTYIDSRNTGNF 429

Query: 436 DVTRAGWCGDYNEASSFLTLMLSSNTSNDPQYHSAEYDAVIEKAKTSTSEEERQKLYADA 495
           DV RA W GDYNE S+FL+L+ S++T N  ++ +  YD ++ +A    + E R   Y  A
Sbjct: 430 DVIRASWVGDYNEPSTFLSLLTSTHTGNISRFTNPTYDKILTQATMENTAEARNADYNAA 489

Query: 496 EKLLARDMPIAPIYQYVRSRLVSPTVGGYPSNNAEDKIYAKDLYI 540
           EK+L    PIAPIYQY   RL+ P V GYP  N ED  Y++ +YI
Sbjct: 490 EKILTEQAPIAPIYQYTNGRLIKPWVKGYPITNPEDVAYSRTMYI 534