Pairwise Alignments

Query, 543 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., oligopeptide ABC transporter substrate-binding protein OppA from Erwinia amylovora T8

 Score =  530 bits (1365), Expect = e-155
 Identities = 252/541 (46%), Positives = 369/541 (68%), Gaps = 4/541 (0%)

Query: 1   MYKNKITQALLLGAGLAVATTSFTSFAANVPAGTKLAPVQELVRGNGTEVASLDPHKTEG 60
           M K K      +G G+ +   S  + AA++PAG  L+  Q+LV  NGTE +SLDP K+EG
Sbjct: 1   MNKTKSRCLAAMGTGMLL---SMQALAADIPAGVSLSDSQKLVINNGTEPSSLDPQKSEG 57

Query: 61  VPESNVIRDLLEGLVNQDANGNVVPGVAESWETTDNKTFTFHIRKDAKWSNGDPVTAHDF 120
           VPES++  +LLEGLV  D NG +VPGVA+SW+    K +TF +R DA+W+NG+PVTA DF
Sbjct: 58  VPESDITLNLLEGLVTTDNNGKLVPGVAQSWQNQQGKVWTFTLRSDARWNNGEPVTAADF 117

Query: 121 VYSFQRAVDPATASPYSWYMEYTKMKNAKEIIAGEKDKSTLGAKAVDDHTLVFELETAVP 180
           VYS+QR V   TASPY+ + +   + NA +I+A E   S LG +A+D H +   L   VP
Sbjct: 118 VYSWQRLVSAETASPYASFAQAAHLLNADKILARELPASALGVRALDAHHVEVTLAEPVP 177

Query: 181 YFVMMMGHTTVKPIHKATVEKFGDQWTKPENFVGNGAYVLDKWVVNERLELKRNPQYWDD 240
           YF+ M+ HT  KP+++ T+E +G++WT+P ++VGNGAY L  WV+NE++ LKRNPQYW++
Sbjct: 178 YFLAMVAHTAFKPLNRRTIETWGEKWTQPAHYVGNGAYTLSDWVINEKIVLKRNPQYWNN 237

Query: 241 KNTVLNKVTYLPIENQVAEMNRFLSGEIQITNE-LPLEHFKRLKKEHPESVQVQGQLCTY 299
           + T + +VT+LPI ++ +++NR+ SGEI I+N  LP + F++LK++    V V   LCT+
Sbjct: 238 RKTAIEQVTFLPISSETSDVNRYRSGEIDISNSALPPDRFQQLKQQLGAQVHVSPYLCTF 297

Query: 300 YYGFNNKKPPFDDVRVRKALSYAIDRDVVSDAILGQGQKPAYFLTPEITAGFSPEMPAYG 359
           YY  NN++PPF+D RVR A+   +DR ++++ I+GQGQ PAY LTP  T G +   PA+ 
Sbjct: 298 YYELNNRRPPFNDARVRTAVKMTLDRSIIAEKIMGQGQIPAYSLTPPYTDGAALTPPAWF 357

Query: 360 KMTQKERIAEAKKLLEEAGYNKSNPLKFTLLYNTSENHKKIATAIQSMWKTSLGVDIALE 419
            ++Q +R  +AK LL EAGYN ++PL+F+LLYNTS+ +K+ A A  SMW  +LG  + L+
Sbjct: 358 TLSQPQRNQQAKALLAEAGYNATHPLRFSLLYNTSDVNKQQAIAAASMWNKNLGAQVTLQ 417

Query: 420 NQEWKTYLDTRRQGNFDVTRAGWCGDYNEASSFLTLMLSSNTSNDPQYHSAEYDAVIEKA 479
           NQEWKT LD+R QGN+DV RA WC DYNE S+FL +M+ + ++N   Y SA +D +++++
Sbjct: 418 NQEWKTLLDSRHQGNYDVARATWCSDYNEPSTFLNMMIGNASTNTTFYRSAAFDELMKRS 477

Query: 480 KTSTSEEERQKLYADAEKLLARDMPIAPIYQYVRSRLVSPTVGGYPSNNAEDKIYAKDLY 539
            T   + +R ++Y  AE+ L  D  + P+Y  V +RL+ P VGGY   + +D +  K  Y
Sbjct: 478 LTVADDVQRAQIYQQAEQRLDEDSALVPVYYRVSARLIKPWVGGYSGKDPQDHMDVKYFY 537

Query: 540 I 540
           I
Sbjct: 538 I 538